RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 KCNJ1P48048 391 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 USP38Q8NB14 1042 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 CELF1Q92879 486 aaKnown RBP20.7■□□□□ 0.9
COL15A1-201ENST00000375001 OPTNQ96CV9 577 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 MPP4Q96JB8 637 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 BCS1LQ9Y276 419 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 SMNDC1O75940 238 aaKnown RBP eCLIP20.7■□□□□ 0.9
COL15A1-201ENST00000375001 GH2P01242 217 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 PRELPP51888 382 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 MEI1Q5TIA1 1274 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 SUGP1Q8IWZ8 645 aaKnown RBP20.7■□□□□ 0.9
COL15A1-201ENST00000375001 DIS3LQ8TF46 1054 aaKnown RBP20.7■□□□□ 0.9
COL15A1-201ENST00000375001 DAPK2Q9UIK4 370 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 SSU72P8A0A1W2PR75 194 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 FAM196BA6NMK8 535 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 SENP7Q9BQF6 1050 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 SIK2Q9H0K1 926 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 PPCSQ9HAB8 311 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 KRT87PA6NCN2 255 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 AP5Z1O43299 807 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 STK4Q13043 487 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 SP110Q9HB58 689 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 CDY2AQ9Y6F7 541 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 CDY1Q9Y6F8 540 aa20.7■□□□□ 0.9
COL15A1-201ENST00000375001 AP3B1O00203 1094 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 ARIH2O95376 493 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 C16orf72Q14CZ0 275 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 R3HDM1Q15032 1099 aaKnown RBP20.69■□□□□ 0.9
COL15A1-201ENST00000375001 NKX1-1Q15270 411 aaPredicted RBP20.69■□□□□ 0.9
COL15A1-201ENST00000375001 SCFD1Q8WVM8 642 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 CATSPER2Q96P56 530 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 GINS4Q9BRT9 223 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 SNX13Q9Y5W8 968 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 ADGRL3Q9HAR2 1447 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 MYO3BQ8WXR4 1341 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 NPHP3-ACAD11A0A0J9YXS1 232 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 PWP1Q13610 501 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 OR8H2Q8N162 312 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 C3orf20Q8ND61 904 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 L2HGDHQ9H9P8 463 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 DDX18Q9NVP1 670 aaKnown RBP20.69■□□□□ 0.9
COL15A1-201ENST00000375001 REREQ9P2R6 1566 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 GPC3P51654 580 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 LAMC2Q13753 1193 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 SCUBE1Q8IWY4 988 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 SH3KBP1Q96B97 665 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 SPDYE5A6NIY4 337 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 CYTH3O43739 400 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 TLR2O60603 784 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 KLK7P49862 253 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 STXBP2Q15833 593 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 SPDYE7PQ495Y7 208 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 ELMO2Q96JJ3 720 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 CCSER1Q9C0I3 900 aa20.69■□□□□ 0.9
COL15A1-201ENST00000375001 MOCS2O96007 188 aaPredicted RBP20.68■□□□□ 0.9
COL15A1-201ENST00000375001 SEMA3FQ13275 785 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 TRIP4Q15650 581 aaPredicted RBP20.68■□□□□ 0.9
COL15A1-201ENST00000375001 FRMD5Q7Z6J6 570 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 FAM20AQ96MK3 541 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 CDC42BPBQ9Y5S2 1711 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 RECQLP46063 649 aaPredicted RBP20.68■□□□□ 0.9
COL15A1-201ENST00000375001 TRIM71Q2Q1W2 868 aaKnown RBP20.68■□□□□ 0.9
COL15A1-201ENST00000375001 ARMCX4Q5H9R4 360 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 RSBN1Q5VWQ0 802 aaPredicted RBP20.68■□□□□ 0.9
COL15A1-201ENST00000375001 PAIP1Q9H074 479 aaKnown RBP20.68■□□□□ 0.9
COL15A1-201ENST00000375001 C6orf203Q9P0P8 240 aaPredicted RBP20.68■□□□□ 0.9
COL15A1-201ENST00000375001 GRID1Q9ULK0 1009 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 PNPLA7Q6ZV29 1317 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 QRICH2Q9H0J4 1663 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 DCAF4L1Q3SXM0 396 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 CENPPQ6IPU0 288 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 TTC23LQ6PF05 361 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 SCN4BQ8IWT1 228 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 MCPH1Q8NEM0 835 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 GANCQ8TET4 914 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 CNKSR1Q969H4 720 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 TMEM117Q9H0C3 514 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 RERGLQ9H628 205 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 DFFAO00273 331 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 ZNF23P17027 643 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 KCNK10P57789 538 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 ORC2Q13416 577 aaPredicted RBP20.68■□□□□ 0.9
COL15A1-201ENST00000375001 TP53BP2Q13625 1128 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 MAPK6Q16659 721 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 ZNF568Q3ZCX4 644 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 ZNF513Q8N8E2 541 aaPredicted RBP20.68■□□□□ 0.9
COL15A1-201ENST00000375001 ST13P5Q8NFI4 369 aaPredicted RBP20.68■□□□□ 0.9
COL15A1-201ENST00000375001 DCAF4Q8WV16 495 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 BTBD7Q9P203 1132 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 LRFN2Q9ULH4 789 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 CDC42BPAQ5VT25 1732 aa20.68■□□□□ 0.9
COL15A1-201ENST00000375001 SOX6P35712 828 aa20.67■□□□□ 0.9
COL15A1-201ENST00000375001 TMEM179Q6ZVK1 233 aa20.67■□□□□ 0.9
COL15A1-201ENST00000375001 CATSPER4Q7RTX7 472 aa20.67■□□□□ 0.9
COL15A1-201ENST00000375001 CDH24Q86UP0 819 aa20.67■□□□□ 0.9
COL15A1-201ENST00000375001 RMDN1Q96DB5 314 aa20.67■□□□□ 0.9
COL15A1-201ENST00000375001 ASIC4Q96FT7 647 aa20.67■□□□□ 0.9
COL15A1-201ENST00000375001 SMAD5Q99717 465 aaKnown RBP20.67■□□□□ 0.9
COL15A1-201ENST00000375001 OSBPL10Q9BXB5 764 aa20.67■□□□□ 0.9
COL15A1-201ENST00000375001 UTYO14607 1347 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms