RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 POLBP06746 335 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 TCF7P36402 384 aaPredicted RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 HSPA9P38646 679 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 HIST2H2ACQ16777 129 aaPredicted RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 HIST2H2AA3Q6FI13 130 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 PKD2L2Q9NZM6 624 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 WARS2Q9UGM6 360 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 OGTO15294 1046 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 ZC3H11AO75152 810 aaKnown RBP eCLIP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 KRT4P19013 534 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 RPS6P62753 249 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 EMILIN2Q9BXX0 1053 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 TMEM39BQ9GZU3 492 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 NPTXRO95502 500 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 GTF2H1P32780 548 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 GALCP54803 685 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 CCDC144BQ3MJ40 725 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 COG1Q8WTW3 980 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 SLC13A1Q9BZW2 595 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 TEX33O43247 280 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 SYF2O95926 243 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 FAM107AO95990 144 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 PDGFRBP09619 1106 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 USP10Q14694 798 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 C10orf120Q5SQS8 335 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 STOX1Q6ZVD7 989 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 METTL16Q86W50 562 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 CCNJLQ8IV13 435 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 RIBC1Q8N443 379 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 SGSM3Q96HU1 749 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 GPR63Q9BZJ6 419 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 RAB6BQ9NRW1 208 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 NMRK1Q9NWW6 199 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 SNX12Q9UMY4 172 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 CNTNAP5Q8WYK1 1306 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 FLOT2Q14254 428 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 RARS2Q5T160 578 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 SETD3Q86TU7 594 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 TMCO5AQ8N6Q1 288 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 SHCBP1Q8NEM2 672 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 MCEEQ96PE7 176 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 GBA2Q9HCG7 927 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 PSMC3IPQ9P2W1 217 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 CDC42BPBQ9Y5S2 1711 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 RNASEH1O60930 286 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 FBXO21O94952 628 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 APRTP07741 180 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 NAMPTP43490 491 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 GRIN1Q05586 938 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 TWF1Q12792 350 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 CDH18Q13634 790 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 POLD3Q15054 466 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 RIN2Q8WYP3 895 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 DACH2Q96NX9 599 aa11.61□□□□□ -0.55
PHACTR4-202ENST00000373839 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 FDFT1P37268 417 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 KPNA1P52294 538 aaPredicted RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 NLRP11P59045 1033 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 ZNF177Q13360 481 aaPredicted RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 LRIG3Q6UXM1 1119 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 PCYOX1LQ8NBM8 494 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 SPATA4Q8NEY3 305 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 ZDHHC15Q96MV8 337 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 TRABDQ9H4I3 376 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 CLASP2O75122 1294 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 ALDH1A2O94788 518 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 URODP06132 367 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 HMBSP08397 361 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 GUCY1A2P33402 732 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 RAB27AP51159 221 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 GEMP55040 296 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 GOLGA7BQ2TAP0 167 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 SLC35G2Q8TBE7 412 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 CDK5RAP1Q96SZ6 601 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 SYNDIG1Q9H7V2 258 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 ZNF609O15014 1411 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 FRMPD1Q5SYB0 1578 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 CCDC195A0A1B0GUA6 201 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 HEATR9A2RTY3 570 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 GTPBP10A4D1E9 387 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 MYMKA6NI61 221 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 ANXA11P50995 505 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 BACE1P56817 501 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 CLEC17AQ6ZS10 378 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 HIPK4Q8NE63 616 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 CINPQ9BW66 212 aaPredicted RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 UNC45AQ9H3U1 944 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 SPACA6W5XKT8 324 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 NCK2O43639 380 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 FAM9CQ8IZT9 166 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 PFDN1O60925 122 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 KITP10721 976 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 THPOP40225 353 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 HPCAP84074 193 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 NFE2Q16621 373 aaPredicted RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 LRRC8BQ6P9F7 803 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 FBXO38Q6PIJ6 1188 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 RBM15Q96T37 977 aaKnown RBP eCLIP11.6□□□□□ -0.551e-7■■■■■ 30
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms