RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 NUP50Q9UKX7 468 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 CCDC189A1A4V9 331 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 C5orf58C9J3I9 102 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 PRMT3O60678 531 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 VAMP4O75379 141 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ARIH2O95376 493 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ALOX15P16050 662 aaPredicted RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 EIF2S3P41091 472 aaKnown RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 KRT28Q7Z3Y7 464 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 CCDC28AQ8IWP9 274 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 NELFCDQ8IXH7 590 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 SNX31Q8N9S9 440 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ARL8AQ96BM9 186 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ENTPD7Q9NQZ7 604 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 SPDYE16A6NNV3 312 aaPredicted RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 RFC4P35249 363 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 SPDYE2Q495Y8 402 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ADSSL1Q8N142 457 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 PHF11Q9UIL8 331 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 SLC12A4Q9UP95 1085 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 METTL21EPA6NDL7 271 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 EXTL3O43909 919 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 UFL1O94874 794 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 SEC24AO95486 1093 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ALOX12P18054 663 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 PTGDRQ13258 359 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 DDI2Q5TDH0 399 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ULK2Q8IYT8 1036 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 KRT35Q92764 455 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 USP44Q9H0E7 712 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 AKAP7Q9P0M2 348 aaPredicted RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 SFMBT1Q9UHJ3 866 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 L1RE1Q9UN81 338 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 HUS1O60921 280 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 COBLO75128 1261 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 CCNHP51946 323 aaPredicted RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 SLC15A2Q16348 729 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 MTHFSDQ2M296 383 aaKnown RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 UNC13DQ70J99 1090 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 NEDD1Q8NHV4 660 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 GIPC3Q8TF64 312 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 RBM15Q96T37 977 aaKnown RBP eCLIP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 HDHD2Q9H0R4 259 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 TRNAU1APQ9NX07 287 aaKnown RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 KCNJ14Q9UNX9 436 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 AIM2O14862 343 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 TTLL1O95922 423 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 TMOD1P28289 359 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 PHKA1P46020 1223 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 RAB2AP61019 212 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 LRRC14Q15048 493 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 TXNDC11Q6PKC3 985 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 CLVS1Q8IUQ0 354 aaPredicted RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 LCORLQ8N3X6 602 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 MB21D1Q8N884 522 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 BTBD10Q9BSF8 475 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 SLC6A15Q9H2J7 730 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 TMEM206Q9H813 350 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 OLA1Q9NTK5 396 aaKnown RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ADAMTS1Q9UHI8 967 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 UGGT2Q9NYU1 1516 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 PIK3CDO00329 1044 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ENO3P13929 434 aaPredicted RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 MMP14P50281 582 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 CTDSPL2Q05D32 466 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 MTA1Q13330 715 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 CAMK1DQ8IU85 385 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 TTC39CQ8N584 583 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ELOVL6Q9H5J4 265 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 EFCAB1Q9HAE3 211 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 E7EWF7 191 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 FGFR4P22455 802 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 RHAGQ02094 409 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 PI16Q6UXB8 463 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 DNAJC7Q99615 494 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 NUAK2Q9H093 628 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ORC2Q13416 577 aaPredicted RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 PTPN21Q16825 1174 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 TMED8Q6PL24 325 aaPredicted RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 CCNB1IP1Q9NPC3 277 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 COMMD9Q9P000 198 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 NIP7Q9Y221 180 aaKnown RBP eCLIP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 EXOC3L1Q86VI1 746 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 ZNF594Q96JF6 807 aaPredicted RBP7.33□□□□□ -1.24
CSMD2-206ENST00000373388 VTA1Q9NP79 307 aa7.33□□□□□ -1.24
CSMD2-206ENST00000373388 DYNC1LI2O43237 492 aaPredicted RBP7.32□□□□□ -1.24
CSMD2-206ENST00000373388 FGFR2P21802 821 aa7.32□□□□□ -1.24
CSMD2-206ENST00000373388 PPHLN1Q8NEY8 458 aaKnown RBP7.32□□□□□ -1.24
CSMD2-206ENST00000373388 WDR70Q9NW82 654 aa7.32□□□□□ -1.24
CSMD2-206ENST00000373388 BFARQ9NZS9 450 aa7.32□□□□□ -1.24
CSMD2-206ENST00000373388 RAPGEFL1Q9UHV5 662 aa7.32□□□□□ -1.24
CSMD2-206ENST00000373388 TTC7AQ9ULT0 858 aaPredicted RBP7.32□□□□□ -1.24
CSMD2-206ENST00000373388 SNX13Q9Y5W8 968 aa7.32□□□□□ -1.24
CSMD2-206ENST00000373388 RIMBP2O15034 1052 aa7.32□□□□□ -1.24
CSMD2-206ENST00000373388 ZBTB7BO15156 539 aaPredicted RBP7.32□□□□□ -1.24
CSMD2-206ENST00000373388 SSNA1O43805 119 aa7.32□□□□□ -1.24
CSMD2-206ENST00000373388 TIMM10P62072 90 aa7.32□□□□□ -1.24
CSMD2-206ENST00000373388 PDIA2Q13087 525 aaKnown RBP7.32□□□□□ -1.24
CSMD2-206ENST00000373388 TOP3AQ13472 1001 aaPredicted RBP7.32□□□□□ -1.24
CSMD2-206ENST00000373388 DYMQ7RTS9 669 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms