RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 P4HA2O15460 535 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 STAG3L1P0CL83 205 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 NRLP54845 237 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 ZNF844Q08AG5 666 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 ZACNQ401N2 412 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 IER5Q5VY09 327 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 EP400NLQ6ZTU2 488 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 TAS1R3Q7RTX0 852 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 ZNF354CQ86Y25 554 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 PALM2Q8IXS6 379 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 GPRC5AQ8NFJ5 357 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 FAM167AQ96KS9 214 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 TIPINQ9BVW5 301 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 NIF3L1Q9GZT8 377 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 SMYD3Q9H7B4 428 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 MINDY3Q9H8M7 445 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 ERAP1Q9NZ08 941 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 INPP5FQ9Y2H2 1132 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 BRWD3Q6RI45 1802 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 EXOC1LA0A1B0GW35 172 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 H3BRB1 525 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 DDX3YO15523 660 aaKnown RBP13.96□□□□□ -0.17
NCDN-203ENST00000373253 CST8O60676 142 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 HADHQ16836 314 aaKnown RBP13.96□□□□□ -0.17
NCDN-203ENST00000373253 NUGGCQ68CJ6 796 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 DARS2Q6PI48 645 aaKnown RBP13.96□□□□□ -0.17
NCDN-203ENST00000373253 MICALCLQ6ZW33 695 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 CCDC63Q8NA47 563 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 TMC2Q8TDI7 906 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 ARHGEF2Q92974 986 aaKnown RBP13.96□□□□□ -0.17
NCDN-203ENST00000373253 CCT8L2Q96SF2 557 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 TUT1Q9H6E5 874 aaKnown RBP13.96□□□□□ -0.17
NCDN-203ENST00000373253 PARVAQ9NVD7 372 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 INTUQ9ULD6 942 aa13.96□□□□□ -0.17
NCDN-203ENST00000373253 HMGB1P1B2RPK0 211 aaPredicted RBP13.96□□□□□ -0.18
NCDN-203ENST00000373253 GZMAP12544 262 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 DESP17661 470 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 EFNA5P52803 228 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 CDH6P55285 790 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 PTENP60484 403 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 PPP2R2AP63151 447 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 BEX3Q00994 111 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 SNAPC2Q13487 334 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 MXD4Q14582 209 aaPredicted RBP13.96□□□□□ -0.18
NCDN-203ENST00000373253 UBAP2Q5T6F2 1119 aaKnown RBP13.96□□□□□ -0.18
NCDN-203ENST00000373253 XRRA1Q6P2D8 792 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 MFSD7Q6UXD7 560 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 C4orf33Q8N1A6 199 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 PRMT1Q99873 361 aaKnown RBP13.96□□□□□ -0.18
NCDN-203ENST00000373253 C17orf75Q9HAS0 396 aa13.96□□□□□ -0.18
NCDN-203ENST00000373253 PIH1D1Q9NWS0 290 aaKnown RBP13.96□□□□□ -0.18
NCDN-203ENST00000373253 RPTORQ8N122 1335 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 WNK3Q9BYP7 1800 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 PODXLO00592 558 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 TBXAS1P24557 533 aaPredicted RBP13.95□□□□□ -0.18
NCDN-203ENST00000373253 TMC3Q7Z5M5 1100 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 NME8Q8N427 588 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 FEZF2Q8TBJ5 459 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 RNF34Q969K3 372 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 HPDLQ96IR7 371 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 CALR3Q96L12 384 aaKnown RBP13.95□□□□□ -0.18
NCDN-203ENST00000373253 LPIN3Q9BQK8 851 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 GINM1Q9NU53 330 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 NOCTQ9UK39 431 aaKnown RBP13.95□□□□□ -0.18
NCDN-203ENST00000373253 MYO9BQ13459 2157 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 CCDC78A2IDD5 438 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 LACTBL1A8MY62 500 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 EIF3HO15372 352 aaKnown RBP eCLIP13.95□□□□□ -0.18
NCDN-203ENST00000373253 CHN1P15882 459 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 MDH1P40925 334 aaKnown RBP13.95□□□□□ -0.18
NCDN-203ENST00000373253 SGSM1Q2NKQ1 1148 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 FASTKD5Q7L8L6 764 aaKnown RBP13.95□□□□□ -0.18
NCDN-203ENST00000373253 CACNA2D3Q8IZS8 1091 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 ABRAQ8N0Z2 381 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 SAMD3Q8N6K7 520 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 RDM1Q8NG50 284 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 SENP7Q9BQF6 1050 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 ARHGAP28Q9P2N2 729 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 CACNG4Q9UBN1 327 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 STK38LQ9Y2H1 464 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 PDGFRAP16234 1089 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 JADE1Q6IE81 842 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 NLRP14Q86W24 1093 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 DNERQ8NFT8 737 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 ACAP3Q96P50 834 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 RBM15Q96T37 977 aaKnown RBP eCLIP13.95□□□□□ -0.182e-6■■■■■ 32.4
NCDN-203ENST00000373253 CGRRF1Q99675 332 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 SYT17Q9BSW7 474 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 MAP3K20Q9NYL2 800 aaKnown RBP13.95□□□□□ -0.18
NCDN-203ENST00000373253 RBPJLQ9UBG7 517 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 TIMM13Q9Y5L4 95 aaPredicted RBP13.95□□□□□ -0.18
NCDN-203ENST00000373253 THSD7AQ9UPZ6 1657 aa13.95□□□□□ -0.18
NCDN-203ENST00000373253 A8MXQ7 604 aa13.94□□□□□ -0.18
NCDN-203ENST00000373253 EDN1P05305 212 aa13.94□□□□□ -0.18
NCDN-203ENST00000373253 C6orf222P0C671 652 aaPredicted RBP13.94□□□□□ -0.18
NCDN-203ENST00000373253 PDIA2Q13087 525 aaKnown RBP13.94□□□□□ -0.18
NCDN-203ENST00000373253 PSMD6Q15008 389 aa13.94□□□□□ -0.18
NCDN-203ENST00000373253 PPP2R5EQ16537 467 aa13.94□□□□□ -0.18
NCDN-203ENST00000373253 DENND1BQ6P3S1 775 aa13.94□□□□□ -0.18
NCDN-203ENST00000373253 PAF1Q8N7H5 531 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms