RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 WASHC2DQ5SRD0 308 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 PPP1R15BQ5SWA1 713 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 RBBP8NLQ8NC74 664 aaPredicted RBP14.47□□□□□ -0.09
USP49-201ENST00000373006 BBOF1Q8ND07 529 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 DCLRE1BQ9H816 532 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 PRPF4O43172 522 aaKnown RBP eCLIP14.47□□□□□ -0.091e-5■■■■□ 19.3
USP49-201ENST00000373006 KRT36O76013 467 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 IFNB1P01574 187 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 UNGP13051 313 aaPredicted RBP14.47□□□□□ -0.09
USP49-201ENST00000373006 TCF4P15884 667 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 EFTUD2Q15029 972 aaKnown RBP eCLIP14.47□□□□□ -0.09
USP49-201ENST00000373006 EAPPQ56P03 285 aaPredicted RBP14.47□□□□□ -0.09
USP49-201ENST00000373006 C4orf50Q6ZRC1 276 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 SV2AQ7L0J3 742 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 GMCL1P1Q8NEA9 526 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 CERKQ8TCT0 537 aa14.47□□□□□ -0.09
USP49-201ENST00000373006 ACSF2Q96CM8 615 aaPredicted RBP14.47□□□□□ -0.09
USP49-201ENST00000373006 PRR11Q96HE9 360 aaPredicted RBP14.47□□□□□ -0.09
USP49-201ENST00000373006 GJD4Q96KN9 370 aaPredicted RBP14.47□□□□□ -0.09
USP49-201ENST00000373006 FESP07332 822 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 MUTP22033 750 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 NSFP46459 744 aaKnown RBP14.46□□□□□ -0.09
USP49-201ENST00000373006 RARRES1P49788 294 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 STAT2P52630 851 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 FAM102BQ5T8I3 360 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 SNX30Q5VWJ9 437 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 HHIPL2Q6UWX4 724 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 NRG4Q8WWG1 115 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 QTRT2Q9H974 415 aaKnown RBP14.46□□□□□ -0.09
USP49-201ENST00000373006 ARL8BQ9NVJ2 186 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 ATRNL1Q5VV63 1379 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 C2orf71A6NGG8 1288 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 PROSCO94903 275 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 ITGB5P18084 799 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 PLCB3Q01970 1234 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 GAD2Q05329 585 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 PDIA2Q13087 525 aaKnown RBP14.46□□□□□ -0.09
USP49-201ENST00000373006 RCN2Q14257 317 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 KPNB1Q14974 876 aaKnown RBP14.46□□□□□ -0.09
USP49-201ENST00000373006 SEPT7Q16181 437 aaKnown RBP14.46□□□□□ -0.09
USP49-201ENST00000373006 RIBC1Q8N443 379 aaPredicted RBP14.46□□□□□ -0.09
USP49-201ENST00000373006 PHC3Q8NDX5 983 aa14.46□□□□□ -0.09
USP49-201ENST00000373006 SMG5Q9UPR3 1016 aaKnown RBP14.46□□□□□ -0.09
USP49-201ENST00000373006 TYROBPO43914 113 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 ACADSP16219 412 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 SP100P23497 879 aaPredicted RBP14.46□□□□□ -0.1
USP49-201ENST00000373006 SLC1A1P43005 524 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 PSMC4P43686 418 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 NR1H3Q13133 447 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 CTC1Q2NKJ3 1217 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 TATDN1Q6P1N9 297 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 TRIM74Q86UV6 250 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 TRIM73Q86UV7 250 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 RHOT1Q8IXI2 618 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 SCYL3Q8IZE3 742 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 SCG3Q8WXD2 468 aaKnown RBP14.46□□□□□ -0.1
USP49-201ENST00000373006 EZH1Q92800 747 aaPredicted RBP14.46□□□□□ -0.1
USP49-201ENST00000373006 ZNF333Q96JL9 665 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 EPAS1Q99814 870 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 C10orf88Q9H8K7 445 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 FBXO6Q9NRD1 293 aaPredicted RBP14.46□□□□□ -0.1
USP49-201ENST00000373006 KANSL3Q9P2N6 904 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 HEY2Q9UBP5 337 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 SUGT1Q9Y2Z0 365 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 MYPNQ86TC9 1320 aa14.46□□□□□ -0.1
USP49-201ENST00000373006 AHCYL1O43865 530 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 GPC3P51654 580 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 SOX10P56693 466 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 SLC45A4Q5BKX6 768 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 FYB2Q5VWT5 728 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 RELL1Q8IUW5 271 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 ACER1Q8TDN7 264 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 TMEM8AQ9HCN3 771 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.45□□□□□ -0.1
USP49-201ENST00000373006 STOML1Q9UBI4 398 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 UMODL1Q5DID0 1318 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 ADAMTSL1Q8N6G6 1762 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 FOCADQ5VW36 1801 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 DNALI1O14645 258 aaPredicted RBP14.45□□□□□ -0.1
USP49-201ENST00000373006 ABHD2P08910 425 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 VIL1P09327 827 aaKnown RBP14.45□□□□□ -0.1
USP49-201ENST00000373006 SSTR1P30872 391 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 DSG3P32926 999 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 GTF2BQ00403 316 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 ACSBG2Q5FVE4 666 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 PLA2G4FQ68DD2 849 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 ZC3H18Q86VM9 953 aaKnown RBP14.45□□□□□ -0.1
USP49-201ENST00000373006 LRRC6Q86X45 466 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 FBXO41Q8TF61 875 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 TDRD3Q9H7E2 651 aaKnown RBP14.45□□□□□ -0.1
USP49-201ENST00000373006 CYLDQ9NQC7 956 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 KCNH7Q9NS40 1196 aa14.45□□□□□ -0.1
USP49-201ENST00000373006 C2CD2LO14523 706 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 CAPN9O14815 690 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 ZC3H12AQ5D1E8 599 aaKnown RBP14.44□□□□□ -0.1
USP49-201ENST00000373006 SPOPLQ6IQ16 392 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 RGS9BPQ6ZS82 235 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 C12orf56Q8IXR9 622 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 WDR60Q8WVS4 1066 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 SLC17A7Q9P2U7 560 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms