RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 TINF2Q9BSI4 451 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 GPBP1L1Q9HC44 474 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 NWD2Q9ULI1 1742 aa7.54□□□□□ -1.2
TGFBR3-202ENST00000370399 CST3P01034 146 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 FAM153BP0C7A2 387 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 SLC26A2P50443 739 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 HNRNPH2P55795 449 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 AMPD2Q01433 879 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 ITIH3Q06033 890 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 TRADDQ15628 312 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 CCDC88AQ3V6T2 1871 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 FAM153CQ494X1 144 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 PPP1R2P3Q6NXS1 205 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 NOTUMQ6P988 496 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 METTL23Q86XA0 190 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 BRSK2Q8IWQ3 736 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 FBXO25Q8TCJ0 367 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 PYROXD1Q8WU10 500 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 SIK2Q9H0K1 926 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 FAM153AQ9UHL3 310 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 TIMM13Q9Y5L4 95 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 NFASCO94856 1347 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 MYPNQ86TC9 1320 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 CST8O60676 142 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 EZRP15311 586 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 NUMBP49757 651 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 BCAR1P56945 870 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 CACNB2Q08289 660 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 ITKQ08881 620 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 IFT88Q13099 833 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 LRRC14Q15048 493 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 IZUMO3Q5VZ72 239 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 TLK2Q86UE8 772 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 SRRM1Q8IYB3 904 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 BBOF1Q8ND07 529 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 HASPINQ8TF76 798 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 TRIM7Q9C029 511 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 PCDHGC5Q9Y5F6 944 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 ADGRA3Q8IWK6 1321 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 FANCGO15287 622 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 PHF2O75151 1096 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 MAFO75444 373 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 ARIH2O95376 493 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 KRT7P08729 469 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 GCNT1Q02742 428 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 DMTNQ08495 405 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 KYNUQ16719 465 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 ZACNQ401N2 412 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 RWDD4Q6NW29 188 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 WDR93Q6P2C0 686 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 ZPBP2Q6X784 338 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 GPR142Q7Z601 462 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 WDR49Q8IV35 697 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 MCOLN2Q8IZK6 566 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 ABRAQ8N0Z2 381 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 PDIK1LQ8N165 341 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 ATL2Q8NHH9 583 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 RAET1EQ8TD07 263 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 GPR20Q99678 358 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 ABCA3Q99758 1704 aa7.53□□□□□ -1.2
TGFBR3-202ENST00000370399 IL18RAPO95256 599 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 PGK1P00558 417 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 NFICP08651 508 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 GBP1P32455 592 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 LIG3P49916 1009 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 CLEC16AQ2KHT3 1053 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 JADE1Q6IE81 842 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 CXCL17Q6UXB2 119 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 CROCCP2Q86T23 111 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 DNAAF3Q8N9W5 541 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 APPL2Q8NEU8 664 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 ZC3H15Q8WU90 426 aaKnown RBP7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 GTF3C2Q8WUA4 911 aaPredicted RBP7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 SHC3Q92529 594 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 ARL8AQ96BM9 186 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 FAF2Q96CS3 445 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 TSNARE1Q96NA8 513 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 PCDHB18PQ96TA0 734 aa7.52□□□□□ -1.2
TGFBR3-202ENST00000370399 ANKRD36CQ5JPF3 1778 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 FAM187AA6NFU0 413 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 RRN3P2A6NIE6 340 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 YY1P25490 414 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 THPOP40225 353 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 ARL1P40616 181 aaPredicted RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 SLC1A1P43005 524 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 FMO1Q01740 532 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 DHX34Q14147 1143 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 ATP13A4Q4VNC1 1196 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 ANKMY2Q8IV38 441 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 FAM71AQ8IYT1 594 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 ZBED8Q8IZ13 594 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 MORC4Q8TE76 937 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 HNRNPLLQ8WVV9 542 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 C12orf42Q96LP6 360 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 LAMA4Q16363 1823 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 MYH1P12882 1939 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 UMODL1Q5DID0 1318 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 B3GAT3O94766 335 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 INHBAP08476 426 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 SLC29A2Q14542 456 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms