RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ATP2C1P98194 919 aaPredicted RBP19■□□□□ 0.63
SNX27-202ENST00000368841 EPHA7Q15375 998 aa19■□□□□ 0.63
SNX27-202ENST00000368841 ATF7IP2Q5U623 682 aa19■□□□□ 0.63
SNX27-202ENST00000368841 RBM15Q96T37 977 aaKnown RBP eCLIP19■□□□□ 0.63
SNX27-202ENST00000368841 FBXO2Q9UK22 296 aaPredicted RBP19■□□□□ 0.63
SNX27-202ENST00000368841 RBP5P82980 135 aa19■□□□□ 0.63
SNX27-202ENST00000368841 TERF2Q15554 542 aa19■□□□□ 0.63
SNX27-202ENST00000368841 GALNTL6Q49A17 601 aa19■□□□□ 0.63
SNX27-202ENST00000368841 PRPF39Q86UA1 669 aaKnown RBP19■□□□□ 0.63
SNX27-202ENST00000368841 SCFD1Q8WVM8 642 aa19■□□□□ 0.63
SNX27-202ENST00000368841 SPASTQ9UBP0 616 aa19■□□□□ 0.63
SNX27-202ENST00000368841 GALCP54803 685 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 STX3Q13277 289 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 CEP55Q53EZ4 464 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 TRIM72Q6ZMU5 477 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 SPATA4Q8NEY3 305 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 OSBPL10Q9BXB5 764 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 SENP2Q9HC62 589 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 CCDC22O60826 627 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 PHF2O75151 1096 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 RHOBTB1O94844 696 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 PARNO95453 639 aaKnown RBP18.99■□□□□ 0.63
SNX27-202ENST00000368841 ITGB3P05106 788 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 GPAT2Q6NUI2 795 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 ARMC6Q6NXE6 501 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 NUDT18Q6ZVK8 323 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 TRMT2AQ8IZ69 625 aaKnown RBP18.99■□□□□ 0.63
SNX27-202ENST00000368841 ZNF614Q8N883 585 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 TUFT1Q9NNX1 390 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 MAP10Q9P2G4 905 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 KCNJ1P48048 391 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 CDC16Q13042 620 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 DDX39BQ13838 428 aaKnown RBP18.99■□□□□ 0.63
SNX27-202ENST00000368841 FAM187AA6NFU0 413 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 TBC1D19Q8N5T2 526 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 ARHGEF26Q96DR7 871 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 MRPL1Q9BYD6 325 aaKnown RBP18.99■□□□□ 0.63
SNX27-202ENST00000368841 ZNF200P98182 395 aaPredicted RBP18.99■□□□□ 0.63
SNX27-202ENST00000368841 DDX42Q86XP3 938 aaKnown RBP eCLIP18.99■□□□□ 0.63
SNX27-202ENST00000368841 TRIM48Q8IWZ4 208 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 ATL2Q8NHH9 583 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 C3orf62Q6ZUJ4 267 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 ZNF280CQ8ND82 737 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 SLC39A10Q9ULF5 831 aa18.99■□□□□ 0.63
SNX27-202ENST00000368841 TAP1Q03518 808 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 SAMD7Q7Z3H4 446 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 TBC1D16Q8TBP0 767 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 FAM96AQ9H5X1 160 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 TARSL2A2RTX5 802 aaKnown RBP18.98■□□□□ 0.63
SNX27-202ENST00000368841 FMO5P49326 533 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 CDC42EP5Q6NZY7 148 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 PLEKHA8Q96JA3 519 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 ITIH6Q6UXX5 1313 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 PMPCBO75439 489 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 CELF2O95319 508 aaKnown RBP18.98■□□□□ 0.63
SNX27-202ENST00000368841 GH1P01241 217 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 TAL1P17542 331 aaPredicted RBP18.98■□□□□ 0.63
SNX27-202ENST00000368841 CHI3L2Q15782 390 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 SPATA18Q8TC71 538 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.98■□□□□ 0.633e-7■■■■□ 20.1
SNX27-202ENST00000368841 NEO1Q92859 1461 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 MAPRE2Q15555 327 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 CARNMT1Q8N4J0 409 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 RPAP1Q9BWH6 1393 aaPredicted RBP18.98■□□□□ 0.63
SNX27-202ENST00000368841 ALDH1A3P47895 512 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 COG2Q14746 738 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 BLOC1S5Q8TDH9 187 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 DAGLAQ9Y4D2 1042 aa18.98■□□□□ 0.63
SNX27-202ENST00000368841 AK9Q5TCS8 1911 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 NBNO60934 754 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 HNRNPCP07910 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
SNX27-202ENST00000368841 USP11P51784 963 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 PGS1Q32NB8 556 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 SLC25A13Q9UJS0 675 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 LOC100653049A0A140TA62 436 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 MYMKA6NI61 221 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 TRAPPC3O43617 180 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 DAB1O75553 588 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 KRT34O76011 436 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 DDX5P17844 614 aaKnown RBP18.97■□□□□ 0.63
SNX27-202ENST00000368841 LCMT1Q9UIC8 334 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 PCDHB8Q9UN66 801 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 ZNF473Q8WTR7 871 aaKnown RBP18.97■□□□□ 0.63
SNX27-202ENST00000368841 OSBPL5Q9H0X9 879 aaPredicted RBP18.97■□□□□ 0.63
SNX27-202ENST00000368841 PTPRHQ9HD43 1115 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 THPOP40225 353 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 BPIFA3Q9BQP9 254 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 CINPQ9BW66 212 aaPredicted RBP18.97■□□□□ 0.63
SNX27-202ENST00000368841 WWP1Q9H0M0 922 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 KCTD10Q9H3F6 313 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 NMRK2Q9NPI5 230 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 PKD2L2Q9NZM6 624 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 SMNDC1O75940 238 aaKnown RBP eCLIP18.97■□□□□ 0.63
SNX27-202ENST00000368841 DHX34Q14147 1143 aaKnown RBP18.97■□□□□ 0.63
SNX27-202ENST00000368841 MED15Q96RN5 788 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 ENTPD7Q9NQZ7 604 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 NDUFB10O96000 172 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 EME1Q96AY2 570 aa18.97■□□□□ 0.63
SNX27-202ENST00000368841 ZNF70Q9UC06 446 aaPredicted RBP18.97■□□□□ 0.63
SNX27-202ENST00000368841 HLA-DRAP01903 254 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms