RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 CCDC6Q16204 474 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 PREPLQ4J6C6 727 aaPredicted RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 ECHDC2Q86YB7 292 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 RHPN2Q8IUC4 686 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 FAM71AQ8IYT1 594 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 SCYL3Q8IZE3 742 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 HIPK4Q8NE63 616 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 OR5B17Q8NGF7 314 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 HELQQ8TDG4 1101 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 ART4Q93070 314 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 PGM2Q96G03 612 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 SGIP1Q9BQI5 828 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 TRABDQ9H4I3 376 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 ZNF70Q9UC06 446 aaPredicted RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 NKX1-2Q9UD57 310 aaPredicted RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 DIS3Q9Y2L1 958 aaKnown RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 NR2E3Q9Y5X4 410 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 PTPRJQ12913 1337 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 TTLL13PA6NNM8 815 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 BHMG1C9JSJ3 638 aaPredicted RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 ENTPD3O75355 529 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 AVILO75366 819 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 NUDT17P0C025 328 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 SETDB1Q15047 1291 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 LRRC36Q1X8D7 754 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 ACAD10Q6JQN1 1059 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 SAMD7Q7Z3H4 446 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 CYTH2Q99418 400 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 CCDC77Q9BR77 488 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 STMN4Q9H169 189 aaPredicted RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 POLR3FQ9H1D9 316 aaPredicted RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 RANBP17Q9H2T7 1088 aaKnown RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 MCM8Q9UJA3 840 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 PHTF1Q9UMS5 762 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 CHMP2BQ9UQN3 213 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 MROH7Q68CQ1 1323 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 ADRA1DP25100 572 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 CALRP27797 417 aaKnown RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 GTF2H1P32780 548 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 TNFSF9P41273 254 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 RAD23BP54727 409 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 IGBP1P78318 339 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 XRCC4Q13426 336 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 TFDP1Q14186 410 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 SIX1Q15475 284 aaPredicted RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 ZRSR2Q15696 482 aaKnown RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 PPP2R5EQ16537 467 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 C11orf63Q6NUN7 778 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 SCYL2Q6P3W7 929 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 SLC39A4Q6P5W5 647 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 LVRNQ6Q4G3 990 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 MTDHQ86UE4 582 aaKnown RBP9.38□□□□□ -0.91
THBS3-201ENST00000368378 MCOLN2Q8IZK6 566 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 JDP2Q8WYK2 163 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 ZNF516Q92618 1163 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 RUNDC3BQ96NL0 473 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 TXLNGYQ9BZA5 131 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 SLC13A1Q9BZW2 595 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 DCLK3Q9C098 648 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 KIAA1683Q9H0B3 1180 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 FBXO40Q9UH90 709 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 PCYOX1Q9UHG3 505 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 LRRC37AA6NMS7 1700 aa9.38□□□□□ -0.91
THBS3-201ENST00000368378 PDE4DIPQ5VU43 2346 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 SLX4Q8IY92 1834 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 A0A1B0GUA9 196 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 ZNF862O60290 1169 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 SLC8A1P32418 973 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 CDH8P55286 799 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 WDR4P57081 412 aaKnown RBP9.37□□□□□ -0.91
THBS3-201ENST00000368378 FSTL1Q12841 308 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 TAF5Q15542 800 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 SLC1A5Q15758 541 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 GNPTABQ3T906 1256 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 PPP1R21Q6ZMI0 780 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 LRRC71Q8N4P6 559 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 TMEM161BQ8NDZ6 487 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 SYTL5Q8TDW5 730 aaPredicted RBP9.37□□□□□ -0.91
THBS3-201ENST00000368378 FBF1Q8TES7 1133 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 PRR11Q96HE9 360 aaPredicted RBP9.37□□□□□ -0.91
THBS3-201ENST00000368378 LRRC37BQ96QE4 947 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 SMC6Q96SB8 1091 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 FBXO6Q9NRD1 293 aaPredicted RBP9.37□□□□□ -0.91
THBS3-201ENST00000368378 UBE4BO95155 1302 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 C10orf71Q711Q0 1435 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 FAM155BO75949 473 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 CAP2P40123 477 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 YWHAGP61981 247 aaKnown RBP eCLIP9.37□□□□□ -0.91
THBS3-201ENST00000368378 TRAF1Q13077 416 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 IRF5Q13568 498 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 NFIL3Q16649 462 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 TAF1BQ53T94 588 aaPredicted RBP9.37□□□□□ -0.91
THBS3-201ENST00000368378 SNRNP48Q6IEG0 339 aaKnown RBP9.37□□□□□ -0.91
THBS3-201ENST00000368378 ARHGEF18Q6ZSZ5 1173 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 TRIM50Q86XT4 487 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 SLC9A9Q8IVB4 645 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 FMNL3Q8IVF7 1028 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 CCDC89Q8N998 374 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 SHC3Q92529 594 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms