RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 ATG4AQ8WYN0 398 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 SETD4Q9NVD3 440 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.94□□□□□ -0.341e-12■■■□□ 17.4
PTPRK-203ENST00000368207 FOXP2O15409 715 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 CXCL8P10145 99 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 ITIH2P19823 946 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 GPD1P21695 349 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 RGS2P41220 211 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 TAF6P49848 677 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 SLC12A3P55017 1021 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 PAN2Q504Q3 1202 aaKnown RBP12.94□□□□□ -0.34
PTPRK-203ENST00000368207 SLC13A5Q86YT5 568 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-203ENST00000368207 MMGT1Q8N4V1 131 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 SLC7A14Q8TBB6 771 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 ATP8B4Q8TF62 1192 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 CDCA5Q96FF9 252 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 CGRRF1Q99675 332 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 ZSWIM1Q9BR11 485 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 TXLNGQ9NUQ3 528 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 SLC38A7Q9NVC3 462 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 UBQLN1Q9UMX0 589 aaKnown RBP12.94□□□□□ -0.34
PTPRK-203ENST00000368207 NEU2Q9Y3R4 380 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 PEAK1Q9H792 1746 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 KBTBD13C9JR72 458 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 B3GAT3O94766 335 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 KCNT1Q5JUK3 1230 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 MTMR8Q96EF0 704 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 TGS1Q96RS0 853 aaKnown RBP12.94□□□□□ -0.34
PTPRK-203ENST00000368207 FRMPD4Q14CM0 1322 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 TGFB3P10600 412 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 PCSK1P29120 753 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 TYK2P29597 1187 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 RECQLP46063 649 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-203ENST00000368207 PAPOLAP51003 745 aaKnown RBP12.93□□□□□ -0.34
PTPRK-203ENST00000368207 PRAMEP78395 509 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 RAPGEF5Q92565 580 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 FAM237AA0A1B0GTK4 181 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 KRT10P13645 584 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 YY1P25490 414 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 RAP1GAPP47736 663 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 VEPH1Q14D04 833 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 ALKBH8Q96BT7 664 aaKnown RBP12.93□□□□□ -0.34
PTPRK-203ENST00000368207 ZBTB45Q96K62 511 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-203ENST00000368207 SARS2Q9NP81 518 aaKnown RBP12.93□□□□□ -0.34
PTPRK-203ENST00000368207 KCNMB3Q9NPA1 279 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 ZFATQ9P243 1243 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 TJP2Q9UDY2 1190 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 RNF219Q5W0B1 726 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-203ENST00000368207 NLRP14Q86W24 1093 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 RNF135Q8IUD6 432 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 PARD3BQ8TEW8 1205 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 ZIM3Q96PE6 472 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 WDR18Q9BV38 432 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTPRK-203ENST00000368207 DMGDHQ9UI17 866 aaKnown RBP12.93□□□□□ -0.34
PTPRK-203ENST00000368207 SLC8A2Q9UPR5 921 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 ATRNO75882 1429 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 CYP3A4P08684 503 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 STAT4Q14765 748 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 IL31RAQ8NI17 732 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 CISHQ9NSE2 258 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 CHMP2BQ9UQN3 213 aa12.93□□□□□ -0.34
PTPRK-203ENST00000368207 IRF6O14896 467 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 ITGA8P53708 1063 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 ARHGEF26Q96DR7 871 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 GPRC5DQ9NZD1 345 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 SLC8A1P32418 973 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 COILP38432 576 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 SLC26A2P50443 739 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 ZNF235Q14590 738 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 SYDE1Q6ZW31 735 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 NIPA1Q7RTP0 329 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 C4orf33Q8N1A6 199 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 CYTH2Q99418 400 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 SEPT5Q99719 369 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 FHDC1Q9C0D6 1143 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 XPO7Q9UIA9 1087 aaKnown RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 TPX2Q9ULW0 747 aaKnown RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 KLRC4O43908 158 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 ACO1P21399 889 aaKnown RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 OAZ1P54368 228 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 COPS2P61201 443 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 OCRLQ01968 901 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 NSUN2Q08J23 767 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 MAP7Q14244 749 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 MOB2Q70IA6 237 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 VSIG10LQ86VR7 867 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 CCDC60Q8IWA6 550 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 CHMP6Q96FZ7 201 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 TRABDQ9H4I3 376 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 RSAD1Q9HA92 442 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 GTPBP10A4D1E9 387 aaKnown RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 PSMD10O75832 226 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 TFRCP02786 760 aaKnown RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 FGRP09769 529 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 NCAM1P13591 858 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 ADORA2AP29274 412 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms