RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 TMEM31Q5JXX7 168 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 C9orf57Q5W0N0 161 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 SPECC1LQ69YQ0 1117 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 EP400NLQ6ZTU2 488 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 ADHFE1Q8IWW8 467 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 EFHBQ8N7U6 833 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 COLGALT1Q8NBJ5 622 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 URGCPQ8TCY9 931 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 TAF4BQ92750 862 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 FAXDC2Q96IV6 333 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 PDLIM2Q96JY6 352 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 MRPL9Q9BYD2 267 aaKnown RBP13.66□□□□□ -0.22
LMX1A-203ENST00000367893 TTYH3Q9C0H2 523 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 INTS2Q9H0H0 1204 aaKnown RBP13.66□□□□□ -0.22
LMX1A-203ENST00000367893 IGFLR1Q9H665 355 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 DAAM1Q9Y4D1 1078 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 NLRC5Q86WI3 1866 aa13.66□□□□□ -0.22
LMX1A-203ENST00000367893 FAM86C2PA6NEL3 165 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 FSCN2O14926 492 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 PHACTR2O75167 634 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 FGF18O76093 207 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 POMCP01189 267 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 ITGB3P05106 788 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 PIK3CAP42336 1068 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 KLK7P49862 253 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 UBE3AQ05086 875 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 TBX2Q13207 712 aaPredicted RBP13.65□□□□□ -0.22
LMX1A-203ENST00000367893 SMAD4Q13485 552 aaKnown RBP13.65□□□□□ -0.22
LMX1A-203ENST00000367893 PTPN21Q16825 1174 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 SGSM1Q2NKQ1 1148 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 KLHDC7AQ5VTJ3 777 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 SMYD5Q6GMV2 418 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 COLGALT2Q8IYK4 626 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 ABI1Q8IZP0 508 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 TMEM130Q8N3G9 435 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 LRRC52Q8N7C0 313 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 IQCDQ96DY2 449 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
LMX1A-203ENST00000367893 UROC1Q96N76 676 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 NUP58Q9BVL2 599 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 EDEM3Q9BZQ6 932 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 GANQ9H2C0 597 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 FAM50BQ9Y247 325 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 INPP5FQ9Y2H2 1132 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 ATG2AQ2TAZ0 1938 aa13.65□□□□□ -0.22
LMX1A-203ENST00000367893 EPHB6O15197 1021 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 B4GALT3O60512 393 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 DDHD2O94830 711 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 RFX1P22670 979 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 POLR2BP30876 1174 aaKnown RBP13.64□□□□□ -0.23
LMX1A-203ENST00000367893 SSTR3P32745 418 aaPredicted RBP13.64□□□□□ -0.23
LMX1A-203ENST00000367893 NRIP1P48552 1158 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 ERVFC1P60507 584 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 MYL6P60660 151 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 TRPC3Q13507 836 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 UPP1Q16831 310 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 PHLDB3Q6NSJ2 640 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 ZNF280BQ86YH2 543 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 LRRC43Q8N309 656 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 SMRP1Q8NCR6 262 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 VN1R2Q8NFZ6 395 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 LSM14BQ9BX40 385 aaKnown RBP13.64□□□□□ -0.23
LMX1A-203ENST00000367893 NAA15Q9BXJ9 866 aaKnown RBP13.64□□□□□ -0.23
LMX1A-203ENST00000367893 GOLGA2P5Q9HBQ8 144 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 APOBEC3GQ9HC16 384 aaKnown RBP13.64□□□□□ -0.23
LMX1A-203ENST00000367893 AAASQ9NRG9 546 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 APEX2Q9UBZ4 518 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 CD207Q9UJ71 328 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 PCDHB12Q9Y5F1 795 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 A0A1W2PQJ5 194 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
LMX1A-203ENST00000367893 PPEF2O14830 753 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 KRT19P08727 400 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 UCHL3P15374 230 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 LAG3P18627 525 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 PAX3P23760 479 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 PNPLA4P41247 253 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
LMX1A-203ENST00000367893 NOP14P78316 857 aaKnown RBP13.64□□□□□ -0.23
LMX1A-203ENST00000367893 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
LMX1A-203ENST00000367893 PLCB3Q01970 1234 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 APBA1Q02410 837 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 GCNT1Q02742 428 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 KCNC3Q14003 757 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 TRIM14Q14142 442 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 WDR44Q5JSH3 913 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 CD300LGQ6UXG3 332 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 NEK11Q8NG66 645 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 PPP2R3CQ969Q6 453 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 HPDLQ96IR7 371 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 ZNF560Q96MR9 790 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 NT5C1BQ96P26 610 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 TMEM175Q9BSA9 504 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 PI4K2AQ9BTU6 479 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 IMPG2Q9BZV3 1241 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 NRDE2Q9H7Z3 1164 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 TLR9Q9NR96 1032 aa13.64□□□□□ -0.23
LMX1A-203ENST00000367893 FAM207AQ9NSI2 230 aaPredicted RBP13.64□□□□□ -0.23
LMX1A-203ENST00000367893 CEP72Q9P209 647 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms