RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ESYT1Q9BSJ8 1104 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 FBRSL1Q9HCM7 1045 aaKnown RBP16.1■□□□□ 0.17
VAMP4-202ENST00000367740 ANO2Q9NQ90 1003 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 HPS4Q9NQG7 708 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 CITO14578 2027 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 SMIM28A0A1B0GU29 152 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 UPK3BL1B0FP48 263 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 UPK3BL2E5RIL1 263 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 CPB1P15086 417 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 MCM2P49736 904 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 RARRES1P49788 294 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 DGKEP52429 567 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 FAM193AP78312 1265 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 LMAN2Q12907 356 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 DMC1Q14565 340 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 PTPAQ15257 358 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 TMEM132AQ24JP5 1023 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 TRIM61Q5EBN2 209 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 GPR158Q5T848 1215 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 ZBTB8OSQ8IWT0 167 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 BEST2Q8NFU1 509 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 HNRNPLLQ8WVV9 542 aaKnown RBP16.09■□□□□ 0.17
VAMP4-202ENST00000367740 POLR3CQ9BUI4 534 aaPredicted RBP16.09■□□□□ 0.17
VAMP4-202ENST00000367740 CCDC113Q9H0I3 377 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 CRISPLD1Q9H336 500 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 ANKEF1Q9NU02 776 aa16.09■□□□□ 0.17
VAMP4-202ENST00000367740 OBSL1O75147 1896 aa16.08■□□□□ 0.17
VAMP4-202ENST00000367740 ZNF638Q14966 1978 aaKnown RBP16.08■□□□□ 0.16
VAMP4-202ENST00000367740 USO1O60763 962 aaKnown RBP16.08■□□□□ 0.16
VAMP4-202ENST00000367740 LYPLA2O95372 231 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 IFNAR1P17181 557 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 ENGP17813 658 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 DCAF4L1Q3SXM0 396 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 RNF20Q5VTR2 975 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 NAIF1Q69YI7 327 aaPredicted RBP16.08■□□□□ 0.16
VAMP4-202ENST00000367740 C11orf74Q86VG3 221 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 DAGLBQ8NCG7 672 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 PIGKQ92643 395 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 EZH1Q92800 747 aaPredicted RBP16.08■□□□□ 0.16
VAMP4-202ENST00000367740 LRIG1Q96JA1 1093 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 FAM83CQ9BQN1 747 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 TPSD1Q9BZJ3 242 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 ATXN3LQ9H3M9 355 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 TPCN1Q9ULQ1 816 aa16.08■□□□□ 0.16
VAMP4-202ENST00000367740 PLXND1Q9Y4D7 1925 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 PCDH15Q96QU1 1955 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 WEE1P30291 646 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 DHPSP49366 369 aaPredicted RBP16.07■□□□□ 0.16
VAMP4-202ENST00000367740 PLD1Q13393 1074 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 RUNX3Q13761 415 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 TRIM68Q6AZZ1 485 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 PPP4R3AQ6IN85 833 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 MAEAQ7L5Y9 396 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 BRF1Q92994 677 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 SUSD3Q96L08 255 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 EIF2AK1Q9BQI3 630 aaKnown RBP16.07■□□□□ 0.16
VAMP4-202ENST00000367740 SMG9Q9H0W8 520 aaKnown RBP16.07■□□□□ 0.16
VAMP4-202ENST00000367740 CCDC86Q9H6F5 360 aaKnown RBP16.07■□□□□ 0.16
VAMP4-202ENST00000367740 GKN1Q9NS71 199 aa16.07■□□□□ 0.16
VAMP4-202ENST00000367740 PTPRBP23467 1997 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 ACKR2O00590 384 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 CPA1P15085 419 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 DRD1P21728 446 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 U2AF2P26368 475 aaKnown RBP eCLIP16.06■□□□□ 0.16
VAMP4-202ENST00000367740 GABRR2P28476 465 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 RDXP35241 583 aaKnown RBP16.06■□□□□ 0.16
VAMP4-202ENST00000367740 EPHB3P54753 998 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 CYP4F8P98187 520 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 MAPK6Q16659 721 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 ZNF423Q2M1K9 1284 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 USP39Q53GS9 565 aaKnown RBP16.06■□□□□ 0.16
VAMP4-202ENST00000367740 XKR4Q5GH76 650 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 BSNDQ8WZ55 320 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 DDX12PQ92771 950 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 ACDQ96AP0 544 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 CCDC43Q96MW1 224 aaKnown RBP16.06■□□□□ 0.16
VAMP4-202ENST00000367740 ZMAT2Q96NC0 199 aaKnown RBP16.06■□□□□ 0.16
VAMP4-202ENST00000367740 PGLYRP2Q96PD5 576 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 NUSAP1Q9BXS6 441 aaKnown RBP16.06■□□□□ 0.16
VAMP4-202ENST00000367740 C2orf40Q9H1Z8 148 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 EBF3Q9H4W6 596 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 SCUBE2Q9NQ36 999 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 THG1LQ9NWX6 298 aaKnown RBP16.06■□□□□ 0.16
VAMP4-202ENST00000367740 RAXQ9Y2V3 346 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 NUB1Q9Y5A7 615 aa16.06■□□□□ 0.16
VAMP4-202ENST00000367740 PRB1P04280 392 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 OR4Q2P0C623 313 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 GCFC2P16383 781 aaKnown RBP16.05■□□□□ 0.16
VAMP4-202ENST00000367740 LIG1P18858 919 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 GALK1P51570 392 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 DUSP4Q13115 394 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 TSGA10IPQ3SY00 556 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 FBXO43Q4G163 708 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 ARHGAP15Q53QZ3 475 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 ALKAL1Q6UXT8 129 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 Q6ZUG5 572 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 KRT25Q7Z3Z0 450 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 RASSF3Q86WH2 238 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms