RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 ARHGEF37A1IGU5 675 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 RIPK2O43353 540 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 GJA8P48165 433 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 PCNX4Q63HM2 1172 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 C1orf228Q6PIY5 440 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 GADL1Q6ZQY3 521 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 APEX2Q9UBZ4 518 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 CAB39Q9Y376 341 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 OVOS2A0A0J9YW53 1432 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 OVOS2Q6IE36 1432 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 TBX3O15119 743 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 HSPA1AP0DMV8 641 aaKnown RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 HSPA1BP0DMV9 641 aaKnown RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 ROR1Q01973 937 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 CENPCQ03188 943 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 MCL1Q07820 350 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 LACTB2Q53H82 288 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 SETD3Q86TU7 594 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 ZNF555Q8NEP9 628 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 FAM213AQ9BRX8 229 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 PACSIN1Q9BY11 444 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 EPB41L4AQ9HCS5 686 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 SYBUQ9NX95 663 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 TEKT2Q9UIF3 430 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 TMA7Q9Y2S6 64 aaKnown RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 SMIM31A0A1B0GVY4 71 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 NEMP1O14524 444 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 WFS1O76024 890 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 SMARCA1P28370 1054 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 ZCWPW1Q9H0M4 648 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 INO80Q9ULG1 1556 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 CRKP46108 304 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 RPS6P62753 249 aaKnown RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 OTUD4Q01804 1114 aaKnown RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 TAP1Q03518 808 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 DHX38Q92620 1227 aaKnown RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 ATP6V1E2Q96A05 226 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 PCMTD2Q9NV79 361 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 CES2O00748 559 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 OSBPP22059 807 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 GNA15P30679 374 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 OSTNP61366 133 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 ZNF394Q53GI3 561 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 PPP6R3Q5H9R7 873 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-202ENST00000367503 NT5DC1Q5TFE4 455 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 HAUS6Q7Z4H7 955 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 PODNQ7Z5L7 613 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 FAM111AQ96PZ2 611 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 LXNQ9BS40 222 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 FEM1BQ9UK73 627 aa12.85□□□□□ -0.35
SHPRH-202ENST00000367503 UBE4BO95155 1302 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 COL15A1P39059 1388 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 SNRPAP09012 282 aaKnown RBP12.84□□□□□ -0.35
SHPRH-202ENST00000367503 KCTD17Q8N5Z5 321 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 PPP1R36Q96LQ0 422 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 GPR101Q96P66 508 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-202ENST00000367503 ZSWIM1Q9BR11 485 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 SENP2Q9HC62 589 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 R3HDM2Q9Y2K5 976 aaKnown RBP12.84□□□□□ -0.35
SHPRH-202ENST00000367503 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 WEE2P0C1S8 567 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 NPEPPSP55786 919 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 KCNQ4P56696 695 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 PTENP60484 403 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 PSMC5P62195 406 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 YWHAHQ04917 246 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-202ENST00000367503 CDO1Q16878 200 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 ARL13BQ3SXY8 428 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 RCOR2Q8IZ40 523 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 FAM167AQ96KS9 214 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 SHCBP1LQ9BZQ2 653 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 INPP5FQ9Y2H2 1132 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 ZNF335Q9H4Z2 1342 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-202ENST00000367503 DPPA5A6NC42 116 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 FAM196BA6NMK8 535 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 RTN3O95197 1032 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-202ENST00000367503 FESP07332 822 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 SRGAP2CP0DJJ0 459 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 FMO5P49326 533 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 SARSP49591 514 aaKnown RBP12.84□□□□□ -0.35
SHPRH-202ENST00000367503 MTTPP55157 894 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 MAPK6Q16659 721 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.84□□□□□ -0.35
SHPRH-202ENST00000367503 THNSL1Q8IYQ7 743 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 MTRQ99707 1265 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 SLC9A2Q9UBY0 812 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 PTPRMP28827 1452 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 CNTNAP5Q8WYK1 1306 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 VIL1P09327 827 aaKnown RBP12.84□□□□□ -0.35
SHPRH-202ENST00000367503 CCNA1P78396 465 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 ZNF699Q32M78 642 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 TTI2Q6NXR4 508 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 SLC25A41Q8N5S1 370 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 RFWD2Q8NHY2 731 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 PARVAQ9NVD7 372 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 SH3GLB1Q9Y371 365 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 HEY1Q9Y5J3 304 aa12.84□□□□□ -0.35
SHPRH-202ENST00000367503 SPAG6O75602 509 aa12.83□□□□□ -0.36
SHPRH-202ENST00000367503 SERPINB9P50453 376 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms