RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 NT5C3AQ9H0P0 336 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 ZNF576Q9H609 170 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 RC3H2Q9HBD1 1191 aaKnown RBP3.45□□□□□ -1.86
PTPRC-203ENST00000367367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.45□□□□□ -1.866e-6■■■■■ 48.1
PTPRC-203ENST00000367367 BLOC1S4Q9NUP1 217 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 MSRAQ9UJ68 235 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 STRIP2Q9ULQ0 834 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 DNM3Q9UQ16 869 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 DAAM1Q9Y4D1 1078 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 PCDHA11Q9Y5I1 949 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 SRPRBQ9Y5M8 271 aaKnown RBP3.45□□□□□ -1.86
PTPRC-203ENST00000367367 SQORQ9Y6N5 450 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 BDP1A6H8Y1 2624 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 TSC2P49815 1807 aa3.45□□□□□ -1.86
PTPRC-203ENST00000367367 ZNF638Q14966 1978 aaKnown RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 WDFY4Q6ZS81 3184 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 USP34Q70CQ2 3546 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 LINC01553A4QN01 128 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 EPOPA6NHQ4 379 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 C9IYK1 514 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 RFXAPO00287 272 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 GIPC1O14908 333 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 TSPAN1O60635 241 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 ERLIN2O94905 339 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 YEATS4O95619 227 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PLA2G4BP0C869 781 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 ZSCAN20P17040 1043 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 ATF7P17544 494 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 ARF4P18085 180 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 CYP11B2P19099 503 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 DDIT3P35638 169 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 ANP32AP39687 249 aaKnown RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 STAT6P42226 847 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PHKA2P46019 1235 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 ME1P48163 572 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 NEK2P51955 445 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PEX3P56589 373 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PTENP60484 403 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 HTRA4P83105 476 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 TAP1Q03518 808 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 MBTD1Q05BQ5 628 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 IFRD2Q12894 506 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 STRN3Q13033 797 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 MAPK7Q13164 816 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 TUBB8Q3ZCM7 444 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 C4orf17Q53FE4 359 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 FAM209AQ5JX71 171 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 SNAP47Q5SQN1 464 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PERM1Q5SV97 790 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 SHC4Q6S5L8 630 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 C1orf186Q6ZWK4 172 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 GPBP1Q86WP2 473 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PHOSPHO2Q8TCD6 241 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 GDPD5Q8WTR4 605 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 MYLIPQ8WY64 445 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 ARNTL2Q8WYA1 636 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 LARP4BQ92615 738 aaKnown RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 STAMQ92783 540 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 LPPQ93052 612 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 MFSD3Q96ES6 412 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 RAD9AQ99638 391 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 REEP2Q9BRK0 252 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 C17orf80Q9BSJ5 609 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 CCSER1Q9C0I3 900 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PRDM12Q9H4Q4 367 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 AGPAT5Q9NUQ2 364 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 MTMR10Q9NXD2 777 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 HES2Q9Y543 173 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 COMMD10Q9Y6G5 202 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 CCDC169A6NNP5 214 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 ASAP2O43150 1006 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PPP6R2O75170 966 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 DGKIO75912 1065 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 KRT18P05783 430 aaKnown RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 HOXA11P31270 313 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PBX3P40426 434 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 NAMPTP43490 491 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PLA2G4AP47712 749 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 NPTX2P47972 431 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 SARSP49591 514 aaKnown RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 AFF1P51825 1210 aaKnown RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 KRT85P78386 507 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 CDC42EP1Q00587 391 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 LMNB2Q03252 620 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 DMP1Q13316 513 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 TFDP1Q14186 410 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 BTG3Q14201 252 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 CLLU1OSQ5K130 101 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 CDCA2Q69YH5 1023 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 PDE12Q6L8Q7 609 aaKnown RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 FAM43BQ6ZT52 329 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 SLC24A5Q71RS6 500 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 DYMQ7RTS9 669 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 CYP2U1Q7Z449 544 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 BTLAQ7Z6A9 289 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 SRGAP1Q7Z6B7 1085 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 CCDC116Q8IYX3 515 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 SYT2Q8N9I0 419 aaPredicted RBP3.44□□□□□ -1.86
PTPRC-203ENST00000367367 DEPTORQ8TB45 409 aa3.44□□□□□ -1.86
PTPRC-203ENST00000367367 KCNG4Q8TDN1 519 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms