RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 FAM9CQ8IZT9 166 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 ATPAF2Q8N5M1 289 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 FEZF2Q8TBJ5 459 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZDHHC15Q96MV8 337 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 NDUFA13Q9P0J0 144 aa12.61□□□□□ -0.39
CDC42BPA-203ENST00000366766 MAN1A2O60476 641 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 ACADSP16219 412 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 RAPGEF5Q92565 580 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 MCEEQ96PE7 176 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 CATSPERBQ9H7T0 1116 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 NR3C2P08235 984 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 PDGFRAP16234 1089 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 PTGISQ16647 500 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 Q3C1V9 767 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 BTBD8Q5XKL5 378 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 TMC2Q8TDI7 906 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 FUT8Q9BYC5 575 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 GOLPH3Q9H4A6 298 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 PRDM16Q9HAZ2 1276 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 TJP2Q9UDY2 1190 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 SNAP23O00161 211 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 TM9SF1O15321 606 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 HBP1O60381 514 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 PRKCEQ02156 737 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 PTK6Q13882 451 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 SH3GL3Q99963 347 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 MTMR2Q13614 643 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 SNX19Q92543 992 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 CEP19Q96LK0 163 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 PKD2L2Q9NZM6 624 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZNF185O15231 689 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 CCDC134Q9H6E4 229 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 KCNH7Q9NS40 1196 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 NCAM2O15394 837 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 VEPH1Q14D04 833 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 SNX17Q15036 470 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 NOA1Q8NC60 698 aaKnown RBP12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 OR6P1Q8NGX9 317 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 RAB6BQ9NRW1 208 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 PRKAG2Q9UGJ0 569 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 COILP38432 576 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 IRX1P78414 480 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 C16orf87Q6PH81 154 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 KIF17Q9P2E2 1029 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 TRPC5OSA6NMA1 111 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 PON1P27169 355 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 HSD17B3P37058 310 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 PTK7Q13308 1070 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 MED21Q13503 144 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 ACAD10Q6JQN1 1059 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 MAGEB18Q96M61 343 aa12.6□□□□□ -0.39
CDC42BPA-203ENST00000366766 FAM237AA0A1B0GTK4 181 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 NAMPTP43490 491 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 NTRK3Q16288 839 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 SLC13A1Q9BZW2 595 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 RIOX1Q9H6W3 641 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 CDC42EP5Q6NZY7 148 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 NOTUMQ6P988 496 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZNF662Q6ZS27 426 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 MS4A14Q96JA4 679 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 IRX2Q9BZI1 471 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 CNOT7Q9UIV1 285 aaKnown RBP12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 TRAF3IP3Q9Y228 551 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 FRMD3A2A2Y4 597 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 GRAMD4Q6IC98 578 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 NAPEPLDQ6IQ20 393 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 SLC24A2Q9UI40 661 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 FAM170AA1A519 330 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 PYGLP06737 847 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 MYL2P10916 166 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 LAMC2Q13753 1193 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 KLRC1P26715 233 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 PDP2Q9P2J9 529 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 RAB21Q9UL25 225 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 HLA-DRAP01903 254 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 CUL2Q13617 745 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 RABGAP1LQ5R372 815 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 RGS9BPQ6ZS82 235 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 RAB42Q8N4Z0 105 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 L1RE1Q9UN81 338 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 FAM205CA6NFA0 338 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZNF197O14709 1029 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 TTC23LQ6PF05 361 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 NIPA1Q7RTP0 329 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 SHOC2Q9UQ13 582 aa12.59□□□□□ -0.39
CDC42BPA-203ENST00000366766 SEC23AQ15436 765 aa12.58□□□□□ -0.39
CDC42BPA-203ENST00000366766 C3orf62Q6ZUJ4 267 aa12.58□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZIM3Q96PE6 472 aa12.58□□□□□ -0.39
CDC42BPA-203ENST00000366766 ATRNO75882 1429 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 GH1P01241 217 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 KCNA4P22459 653 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 SLC12A1Q13621 1099 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 ADRM1Q16186 407 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 STX18Q9P2W9 335 aaKnown RBP12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 NFX1Q12986 1120 aaKnown RBP12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 USP49Q70CQ1 688 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 GID8Q9NWU2 228 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 AFF2P51816 1311 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 SPATA31A5Q5VU36 1347 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms