RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 USP37Q86T82 979 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 CCDC105Q8IYK2 499 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 MCRS1Q96EZ8 462 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 TMEM209Q96SK2 561 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 DDX23Q9BUQ8 820 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 PLA2G2FQ9BZM2 168 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 TRIM9Q9C026 710 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 DNAJC25Q9H1X3 360 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 CUEDC2Q9H467 287 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ARHGEF3Q9NR81 526 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 DPP3Q9NY33 737 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 CA14Q9ULX7 337 aa14.8□□□□□ -0.04
TNFRSF1A-202ENST00000366159 WDR87Q6ZQQ6 2873 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ZNF197O14709 1029 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 F13A1P00488 732 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ODC1P11926 461 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 HOXD13P35453 343 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 PKP1Q13835 747 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 SCARA3Q6AZY7 606 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 BRSK2Q8IWQ3 736 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 HS6ST3Q8IZP7 471 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 GLIS3Q8NEA6 775 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 OR10T2Q8NGX3 314 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ZNF512Q96ME7 567 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 KXD1Q9BQD3 176 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 CBWD1Q9BRT8 395 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 FAM213AQ9BRX8 229 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 TBC1D17Q9HA65 648 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 FAM86C1Q9NVL1 165 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 HSFX1Q9UBD0 423 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 YIPF1Q9Y548 306 aa14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ZFHX2Q9C0A1 2572 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1A-202ENST00000366159 COL4A3Q01955 1670 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 MTMR11A4FU01 709 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 SHISA7A6NL88 538 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 PRPF6O94906 941 aaKnown RBP14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 LDHAP00338 332 aaKnown RBP14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 TAF6P49848 677 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 EHHADHQ08426 723 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 DUSP4Q13115 394 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 TANGO2Q6ICL3 276 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 PDZD4Q76G19 769 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 EPM2AIP1Q7L775 607 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 TMC8Q8IU68 726 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 HSCBQ8IWL3 235 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 CCDC65Q8IXS2 484 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 DTWD2Q8NBA8 298 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 LEMD2Q8NC56 503 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ATOH1Q92858 354 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ELSPBP1Q96BH3 223 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 SAAL1Q96ER3 474 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ZSWIM3Q96MP5 696 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 PGLYRP2Q96PD5 576 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 C7orf25Q9BPX7 421 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 TMEM206Q9H813 350 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 TRPV4Q9HBA0 871 aa14.78□□□□□ -0.04
TNFRSF1A-202ENST00000366159 KPNA7A9QM74 516 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 CYB561D2O14569 222 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 EXTL3O43909 919 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 GLULP15104 373 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 NBL1P41271 181 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 SLC44A4Q53GD3 710 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 FAM78AQ5JUQ0 283 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 CYP4A22Q5TCH4 519 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ATL3Q6DD88 541 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 IQCEQ6IPM2 695 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 LRRTM3Q86VH5 581 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 TTC9BQ8N6N2 239 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 C1orf127Q8N9H9 656 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 IQUBQ8NA54 791 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ATAD1Q8NBU5 361 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ZNF507Q8TCN5 953 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 HPS3Q969F9 1004 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ASB16Q96NS5 453 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 LRRC27Q9C0I9 530 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 ZCWPW1Q9H0M4 648 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 DSEQ9UL01 958 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 PCDHA7Q9UN72 937 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 SLC27A5Q9Y2P5 690 aa14.77□□□□□ -0.04
TNFRSF1A-202ENST00000366159 PRKCQQ04759 706 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SNW1Q13573 536 aaKnown RBP14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FOXD4L5Q5VV16 416 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 WSCD1Q658N2 575 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ARMCX5Q6P1M9 558 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ELMOD1Q8N336 334 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PJA1Q8NG27 643 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SHKBP1Q8TBC3 707 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 KCNG4Q8TDN1 519 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FOXD4L4Q8WXT5 416 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 DHX58Q96C10 678 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PYM1Q9BRP8 204 aaKnown RBP14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PCIF1Q9H4Z3 704 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ASAH2Q9NR71 780 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 RBAKQ9NYW8 714 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 RCOR1Q9UKL0 485 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SIT1Q9Y3P8 196 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 CFAP54Q96N23 3096 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 COL4A2P08572 1712 aa14.76□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GOLGA8IPA6NC78 632 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GOLGA8JA6NMD2 632 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms