RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SOAT2O75908 522 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 NXPH3O95157 252 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 ANXA1P04083 346 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 TMEM191BP0C7N4 346 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 MTHFD1P11586 935 aaKnown RBP3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 PPP3CBP16298 524 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 DDCP20711 480 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 MPGP29372 298 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 SLC5A3P53794 718 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 HTRA4P83105 476 aaPredicted RBP3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 SUPT20HL1Q3ZLR7 823 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 TMEM119Q4V9L6 283 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 AARS2Q5JTZ9 985 aaKnown RBP3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 CNNM4Q6P4Q7 775 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 CATSPERGQ6ZRH7 1159 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 MEPCEQ7L2J0 689 aaKnown RBP3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 IL17RDQ8NFM7 739 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 ADAMTS15Q8TE58 950 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 REPS1Q96D71 796 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 MRFAP1L1Q96HT8 127 aa3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 C11orf54Q9H0W9 315 aaPredicted RBP3.13□□□□□ -1.91
RNU6-238P-201ENST00000363313 VWC2LB2RUY7 222 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 TRIAP1O43715 76 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 AMY1AP04745 511 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 NR2F6P10588 404 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 CYP2D6P10635 497 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 GSPT1P15170 499 aaKnown RBP3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 ZFXP17010 805 aaPredicted RBP3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 BPIP17213 487 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 SFPQP23246 707 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 SLC6A9P48067 706 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 HNRNPMP52272 730 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 FAPQ12884 760 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 CD300EQ496F6 205 aaPredicted RBP3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 PREPLQ4J6C6 727 aaPredicted RBP3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 TEDDM1Q5T9Z0 273 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 PRAMEF17Q5VTA0 474 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 C16orf86Q6ZW13 317 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 WDR53Q7Z5U6 358 aaPredicted RBP3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 HOMER1Q86YM7 354 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 NIM1KQ8IY84 436 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 CAMKK1Q8N5S9 505 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 VCPIP1Q96JH7 1222 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 LYZL4Q96KX0 146 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 RNPC3Q96LT9 517 aaKnown RBP3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 SPRTNQ9H040 489 aaPredicted RBP3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 LDAHQ9H6V9 325 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 PLAAQ9Y263 795 aa3.12□□□□□ -1.91
RNU6-238P-201ENST00000363313 CCDC187A0A096LP49 1063 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 KIAA0391O15091 583 aaKnown RBP3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 FGBP02675 491 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 KRT10P13645 584 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 NDUFB7P17568 137 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 NPTX2P47972 431 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 DHCR24Q15392 516 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 SF3A1Q15459 793 aaKnown RBP3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 PABPC1LQ4VXU2 614 aaKnown RBP3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 SLC29A4Q7RTT9 530 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 KRT78Q8N1N4 520 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 CFAP52Q8N1V2 620 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 AOPEPQ8N6M6 819 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 POC1BQ8TC44 478 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 ATRIPQ8WXE1 791 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 NELL2Q99435 816 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 ARHGEF3Q9NR81 526 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 JKAMPQ9P055 326 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 EDARQ9UNE0 448 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 AFG3L2Q9Y4W6 797 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 CD2APQ9Y5K6 639 aa3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 MYBBP1AQ9BQG0 1328 aaKnown RBP3.11□□□□□ -1.91
RNU6-238P-201ENST00000363313 A0A0B4J269 797 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 SMIM35A0A1B0GVV1 85 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 ERVV-2B6SEH9 535 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 TOR1BO14657 336 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 SLC43A1O75387 559 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 DNAJB5O75953 348 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 AGFG2O95081 481 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 EBLN1P0CF75 366 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 WASP42768 502 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 LINC00205P59089 165 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 TUBB3Q13509 450 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 GTF2H3Q13889 308 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 SEPT2Q15019 361 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 RABEP1Q15276 862 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 UTP14CQ5TAP6 766 aaKnown RBP3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 SLC2A7Q6PXP3 512 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 FANCBQ8NB91 859 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 PRSS3P2Q8NHM4 247 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 PMFBP1Q8TBY8 1022 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 LMBR1Q8WVP7 490 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 FKBP10Q96AY3 582 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 TARS2Q9BW92 718 aaKnown RBP3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 TLR10Q9BXR5 811 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 AMBRA1Q9C0C7 1298 aa3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 VSX1Q9NZR4 365 aaPredicted RBP3.1□□□□□ -1.91
RNU6-238P-201ENST00000363313 FAM90A8PA6NJQ4 464 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 E5RJQ4 531 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 BCAR3O75815 825 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 FAM90A13PP0C7W8 464 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 FAM90A24PP0C7X0 464 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms