RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 SOWAHAQ2M3V2 549 aa18.18■□□□□ 0.5
LMNA-202ENST00000361308 TOP6BLQ8N6T0 577 aa18.18■□□□□ 0.5
LMNA-202ENST00000361308 SMYD3Q9H7B4 428 aa18.18■□□□□ 0.5
LMNA-202ENST00000361308 PCDHB12Q9Y5F1 795 aa18.18■□□□□ 0.5
LMNA-202ENST00000361308 ARHGEF37A1IGU5 675 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 LCHNA4D1U4 455 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 AKR1B15C9JRZ8 316 aaPredicted RBP18.17■□□□□ 0.5
LMNA-202ENST00000361308 I3L4J1 428 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 RNF225M0QZC1 329 aaPredicted RBP18.17■□□□□ 0.5
LMNA-202ENST00000361308 CD58P19256 250 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 KRT9P35527 623 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 ADKP55263 362 aaKnown RBP18.17■□□□□ 0.5
LMNA-202ENST00000361308 YWHAEP62258 255 aaKnown RBP18.17■□□□□ 0.5
LMNA-202ENST00000361308 TDHQ8IZJ6 230 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 COLGALT1Q8NBJ5 622 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 BAP1Q92560 729 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 CLP1Q92989 425 aaKnown RBP18.17■□□□□ 0.5
LMNA-202ENST00000361308 IGSF21Q96ID5 467 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 PDLIM2Q96JY6 352 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 SUSD3Q96L08 255 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 CISHQ9NSE2 258 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 MARCH5Q9NX47 278 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 CEP290O15078 2479 aa18.17■□□□□ 0.5
LMNA-202ENST00000361308 M0QZQ0 153 aa18.16■□□□□ 0.5
LMNA-202ENST00000361308 FOXN3O00409 490 aaPredicted RBP18.16■□□□□ 0.5
LMNA-202ENST00000361308 ODC1P11926 461 aa18.16■□□□□ 0.5
LMNA-202ENST00000361308 USP8P40818 1118 aa18.16■□□□□ 0.5
LMNA-202ENST00000361308 STAT1P42224 750 aa18.16■□□□□ 0.5
LMNA-202ENST00000361308 RAP1GAPP47736 663 aa18.16■□□□□ 0.5
LMNA-202ENST00000361308 ELAVL2Q12926 359 aaKnown RBP18.16■□□□□ 0.5
LMNA-202ENST00000361308 TMEM173Q86WV6 379 aaPredicted RBP18.16■□□□□ 0.5
LMNA-202ENST00000361308 CNGA4Q8IV77 575 aa18.16■□□□□ 0.5
LMNA-202ENST00000361308 TTC39CQ8N584 583 aa18.16■□□□□ 0.5
LMNA-202ENST00000361308 NUCKS1Q9H1E3 243 aaKnown RBP18.16■□□□□ 0.5
LMNA-202ENST00000361308 FAM124BQ9H5Z6 455 aaPredicted RBP18.16■□□□□ 0.5
LMNA-202ENST00000361308 SPG21Q9NZD8 308 aa18.16■□□□□ 0.5
LMNA-202ENST00000361308 MYO6Q9UM54 1294 aa18.16■□□□□ 0.5
LMNA-202ENST00000361308 PCDHA11Q9Y5I1 949 aa18.16■□□□□ 0.5
LMNA-202ENST00000361308 SF3B1O75533 1304 aaKnown RBP eCLIP18.16■□□□□ 0.52e-6■■■■■ 125.3
LMNA-202ENST00000361308 LRRC53A6NM62 1247 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 F8VZ95 297 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 TACC1O75410 805 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 FAM163BP0C2L3 166 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 MYOGP15173 224 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 PPM1AP35813 382 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 JAM2P57087 298 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 CCDC173Q0VFZ6 552 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 TSR1Q2NL82 804 aaKnown RBP18.15■□□□□ 0.5
LMNA-202ENST00000361308 WSCD1Q658N2 575 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 FUT10Q6P4F1 479 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 SLC39A11Q8N1S5 342 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 TMEM86AQ8N2M4 240 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 PDCL2Q8N4E4 241 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 OR8K1Q8NGG5 319 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 SHC3Q92529 594 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 TMEM169Q96HH4 297 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 GPR62Q9BZJ7 368 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 GPR88Q9GZN0 384 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 SDCBP2Q9H190 292 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 DSEQ9UL01 958 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 L1RE1Q9UN81 338 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 PCDHB4Q9Y5E5 795 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 TIMM13Q9Y5L4 95 aaPredicted RBP18.15■□□□□ 0.5
LMNA-202ENST00000361308 MFAP3LO75121 409 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 KRT5P13647 590 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 ACO1P21399 889 aaKnown RBP18.15■□□□□ 0.5
LMNA-202ENST00000361308 FAM171A1Q5VUB5 890 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 PDXDC1Q6P996 788 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 TMEM270Q6UE05 265 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 CHRDL2Q6WN34 429 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 LIMS2Q7Z4I7 341 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 METTL23Q86XA0 190 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 FMNL3Q8IVF7 1028 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 ADGRF2Q8IZF7 708 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 OR6B3Q8NGW1 331 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 MRPL45Q9BRJ2 306 aaKnown RBP18.15■□□□□ 0.5
LMNA-202ENST00000361308 SNX25Q9H3E2 840 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 PCDHB8Q9UN66 801 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 RWDD3Q9Y3V2 267 aa18.15■□□□□ 0.5
LMNA-202ENST00000361308 LINC01553A4QN01 128 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 CA3P07451 260 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 LINC00271P0C7V0 271 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 SOX5P35711 763 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 GNL1P36915 607 aaPredicted RBP18.14■□□□□ 0.49
LMNA-202ENST00000361308 GSDMDP57764 484 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 KRT17Q04695 432 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 GOLGA8FQ08AF8 430 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 GOLGA8DPQ0D2H9 430 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 SFMBT2Q5VUG0 894 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 CCDC186Q7Z3E2 898 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 CEP57Q86XR8 500 aa18.14■□□□□ 0.49
LMNA-202ENST00000361308 BCL7CQ8WUZ0 217 aaPredicted RBP18.14■□□□□ 0.49
LMNA-202ENST00000361308 BARX2Q9UMQ3 279 aaPredicted RBP18.14■□□□□ 0.49
LMNA-202ENST00000361308 SYN3O14994 580 aa18.13■□□□□ 0.49
LMNA-202ENST00000361308 CYP11A1P05108 521 aa18.13■□□□□ 0.49
LMNA-202ENST00000361308 CCDC172P0C7W6 258 aa18.13■□□□□ 0.49
LMNA-202ENST00000361308 PNMA6AP0CW24 399 aaPredicted RBP18.13■□□□□ 0.49
LMNA-202ENST00000361308 TYMPP19971 482 aa18.13■□□□□ 0.49
LMNA-202ENST00000361308 BMPR1AP36894 532 aa18.13■□□□□ 0.49
LMNA-202ENST00000361308 LHX1P48742 406 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms