RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 HERC5Q9UII4 1024 aaKnown RBP14.63□□□□□ -0.07
SMC5-201ENST00000361138 ZNF229Q9UJW7 825 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 PCDHGC5Q9Y5F6 944 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 THNSL1Q8IYQ7 743 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 NCLNQ969V3 563 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 PAGR1Q9BTK6 254 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 ARHGAP26Q9UNA1 814 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 CDYLQ9Y232 598 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 SIK3Q9Y2K2 1263 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 AFF2P51816 1311 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 F5H6K3 240 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 AHCYL1O43865 530 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 APRTP07741 180 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 CA8P35219 290 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 PBX1P40424 430 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 KLRC3Q07444 240 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 PRKG1Q13976 671 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 FLOT2Q14254 428 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 NT5DC3Q86UY8 548 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 TTC8Q8TAM2 541 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 OPTNQ96CV9 577 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 SH3GL2Q99962 352 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 GRID1Q9ULK0 1009 aa14.63□□□□□ -0.07
SMC5-201ENST00000361138 M0QZ92 97 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 FKBP6O75344 327 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 KCNQ4P56696 695 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 SNRPFP62306 86 aaKnown RBP14.62□□□□□ -0.07
SMC5-201ENST00000361138 FAM196AQ6ZSG2 479 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 KCTD17Q8N5Z5 321 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 INPP5DQ92835 1189 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 C20orf96Q9NUD7 363 aaPredicted RBP14.62□□□□□ -0.07
SMC5-201ENST00000361138 SERPINB10P48595 397 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 HABP4Q5JVS0 413 aaKnown RBP14.62□□□□□ -0.07
SMC5-201ENST00000361138 SCFD1Q8WVM8 642 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 JMJD4Q9H9V9 463 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 PCDHB2Q9Y5E7 798 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 SHBGP04278 402 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 MTHFD1LQ6UB35 978 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 ZNF34Q8IZ26 560 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 CYGBQ8WWM9 190 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 MPP4Q96JB8 637 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 RUSC1Q9BVN2 902 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 AGPAT3Q9NRZ7 376 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 FAM196BA6NMK8 535 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 ARHGDIAP52565 204 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 CACNB3P54284 484 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 FEZF2Q8TBJ5 459 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 UNC45AQ9H3U1 944 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 CORO1CQ9ULV4 474 aaPredicted RBP14.62□□□□□ -0.07
SMC5-201ENST00000361138 POU5F1BQ06416 359 aa14.62□□□□□ -0.07
SMC5-201ENST00000361138 REXO2Q9Y3B8 237 aaKnown RBP14.62□□□□□ -0.07
SMC5-201ENST00000361138 TRMT5Q32P41 509 aaKnown RBP14.61□□□□□ -0.07
SMC5-201ENST00000361138 FASTKD1Q53R41 847 aaKnown RBP14.61□□□□□ -0.07
SMC5-201ENST00000361138 RNPEPL1Q9HAU8 725 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 OLFML3Q9NRN5 406 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 GABBR1Q9UBS5 961 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 SEPT3Q9UH03 358 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 SLC24A2Q9UI40 661 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 TRIM49D1C9J1S8 452 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 SNX3O60493 162 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 DEAF1O75398 565 aaPredicted RBP14.61□□□□□ -0.07
SMC5-201ENST00000361138 KCNJ2P63252 427 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 MTFR1Q15390 333 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 CNGA2Q16280 664 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 RSPH3Q86UC2 560 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 KIAA2013Q8IYS2 634 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 ZBTB18Q99592 522 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 PAK5Q9P286 719 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 ZNF212Q9UDV6 495 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 C2CD2Q9Y426 696 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 CASP4P49662 377 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 GRM1Q13255 1194 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 MIIPQ5JXC2 388 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 FBXO36Q8NEA4 188 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 MAGEC3Q8TD91 643 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 PPP2R3CQ969Q6 453 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 ADNPQ9H2P0 1102 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 GID8Q9NWU2 228 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 LOC100653049A0A140TA62 436 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 LIN7AO14910 233 aaPredicted RBP14.61□□□□□ -0.07
SMC5-201ENST00000361138 KRT34O76011 436 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 CLPTM1O96005 669 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 TCN1P20061 433 aaPredicted RBP14.61□□□□□ -0.07
SMC5-201ENST00000361138 DCAF15Q66K64 600 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 OR6B3Q8NGW1 331 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 LZICQ8WZA0 190 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 TRAPPC9Q96Q05 1148 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 PAFAH2Q99487 392 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 CDY2AQ9Y6F7 541 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 CDY1Q9Y6F8 540 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 IVNS1ABPQ9Y6Y0 642 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 AGLP35573 1532 aa14.61□□□□□ -0.07
SMC5-201ENST00000361138 MED24O75448 989 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 SRP72O76094 671 aaKnown RBP14.6□□□□□ -0.07
SMC5-201ENST00000361138 GIT2Q14161 759 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 R3HDM1Q15032 1099 aaKnown RBP14.6□□□□□ -0.07
SMC5-201ENST00000361138 EFHC1Q5JVL4 640 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 RNF43Q68DV7 783 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 MYLK4Q86YV6 388 aaPredicted RBP14.6□□□□□ -0.07
SMC5-201ENST00000361138 FAM71DQ8N9W8 422 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms