RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 FRMD8P1Q9BZ68 369 aaPredicted RBP10.12□□□□□ -0.79
CUX1-203ENST00000360264 STAG3L1P0CL83 205 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 EDRF1Q3B7T1 1238 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 CCDC126Q96EE4 140 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 GPR63Q9BZJ6 419 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 ERAP1Q9NZ08 941 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 HACL1Q9UJ83 578 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 SLC25A13Q9UJS0 675 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 PKN2Q16513 984 aaKnown RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 DEPDC7Q96QD5 511 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 ATF5Q9Y2D1 282 aaPredicted RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 POTEFA5A3E0 1075 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 POTEIP0CG38 1075 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 ALDH7A1P49419 539 aaKnown RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 LRRC74AQ0VAA2 488 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 ANKS6Q68DC2 871 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 POTEGQ6S5H5 508 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 POTEEQ6S8J3 1075 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 STAG2Q8N3U4 1231 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 NT5C1AQ9BXI3 368 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 ETNK1Q9HBU6 452 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 COG2Q14746 738 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 ZNF677Q86XU0 584 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 PARP9Q8IXQ6 854 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 CD274Q9NZQ7 290 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 HIST2H2ACQ16777 129 aaPredicted RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 HIST2H2AA3Q6FI13 130 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 C10orf88Q9H8K7 445 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 EPHA7Q15375 998 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 FAR2Q96K12 515 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 ABCA8O94911 1581 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 MYH3P11055 1940 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 F8W810 466 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 MUTP22033 750 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 PTRHD1Q6GMV3 140 aaKnown RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 PGBD3Q8N328 593 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 TUBGCP3Q96CW5 907 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 MKNK1Q9BUB5 465 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 CINPQ9BW66 212 aaPredicted RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 SAMD9LQ8IVG5 1584 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 CDC42BPBQ9Y5S2 1711 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 ATP1A1P05023 1023 aaKnown RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 KRT20P35900 424 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 WDR72Q3MJ13 1102 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 SLC35G2Q8TBE7 412 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 TCP11X1B4DZS4 312 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 ATP9BO43861 1147 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 HSPA9P38646 679 aaKnown RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 TRIP4Q15650 581 aaPredicted RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 IYDQ6PHW0 289 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 CCDC60Q8IWA6 550 aaPredicted RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 THAP11Q96EK4 314 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 STMN3Q9NZ72 180 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 PITPNM2Q9BZ72 1349 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 SNX30Q5VWJ9 437 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 AGGF1Q8N302 714 aaeCLIP10.11□□□□□ -0.792e-7■■■■■ 57.8
CUX1-203ENST00000360264 CABIN1Q9Y6J0 2220 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 TADA2AO75478 443 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 RASSF9O75901 435 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 NAPEPLDQ6IQ20 393 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 NUDT12Q9BQG2 462 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 NLNQ9BYT8 704 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 TAF1DQ9H5J8 278 aaPredicted RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 GRID1Q9ULK0 1009 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 QRICH1Q2TAL8 776 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 AGBL1Q96MI9 1066 aa10.11□□□□□ -0.79
CUX1-203ENST00000360264 CPSF1Q10570 1443 aaKnown RBP10.11□□□□□ -0.79
CUX1-203ENST00000360264 H7C0S8 307 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 AGTP01019 485 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 SPRP35270 261 aaPredicted RBP10.1□□□□□ -0.79
CUX1-203ENST00000360264 USP17L6PQ6QN14 398 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 SP8Q8IXZ3 490 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 ELOA2Q8IYF1 753 aaPredicted RBP10.1□□□□□ -0.79
CUX1-203ENST00000360264 NEDD1Q8NHV4 660 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 SGSM3Q96HU1 749 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 APOL5Q9BWW9 433 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 GOLPH3Q9H4A6 298 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 MINPP1Q9UNW1 487 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 RRN3P2A6NIE6 340 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 RNASEH1O60930 286 aaKnown RBP10.1□□□□□ -0.79
CUX1-203ENST00000360264 MTA1Q13330 715 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 TXNRD1Q16881 649 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 LNPEPQ9UIQ6 1025 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 PSTPIP1O43586 416 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 SERPIND1P05546 499 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 RXRGP48443 463 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 SLC25A27O95847 323 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 DARSP14868 501 aaKnown RBP10.1□□□□□ -0.79
CUX1-203ENST00000360264 POU4F1Q01851 419 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 PNPLA7Q6ZV29 1317 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 XKR3Q5GH77 459 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 IRAK1BP1Q5VVH5 260 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 TDRD10Q5VZ19 366 aaKnown RBP10.1□□□□□ -0.79
CUX1-203ENST00000360264 CYGBQ8WWM9 190 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 KLHL11Q9NVR0 708 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 ADAM30Q9UKF2 790 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 EIF3LQ9Y262 564 aaKnown RBP10.1□□□□□ -0.79
CUX1-203ENST00000360264 EMSYQ7Z589 1322 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 PTGER2P43116 358 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 SERPINB8P50452 374 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms