RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 SMYD3Q9H7B4 428 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 RPF1Q9H9Y2 349 aaKnown RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 SLC5A4Q9NY91 659 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 SIX4Q9UIU6 781 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 ESYT3A0FGR9 886 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 ANO9A1A5B4 782 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 PIK3R2O00459 728 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 MAGEB2O15479 319 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 THAP12O43422 761 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 GAS2O43903 313 aaKnown RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 CEP104O60308 925 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 LDHAP00338 332 aaKnown RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 F2P00734 622 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 ITGA4P13612 1032 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 IGFBP6P24592 240 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 CCND3P30281 292 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 HOXA11P31270 313 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 PSEN2P49810 448 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 CDR2Q01850 454 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 TRPC3Q13507 836 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 TRADDQ15628 312 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 DUOXA2Q1HG44 320 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF699Q32M78 642 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 SLC10A6Q3KNW5 377 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 WDR72Q3MJ13 1102 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 FAM47CQ5HY64 1035 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 DCAF12L1Q5VU92 463 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 CATSPER4Q7RTX7 472 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 KLHL7Q8IXQ5 586 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 RNF10Q8N5U6 811 aaKnown RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 C1orf127Q8N9H9 656 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 RBBP8NLQ8NC74 664 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 RABGGTAQ92696 567 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 KRT35Q92764 455 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 C18orf25Q96B23 403 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 LPIN3Q9BQK8 851 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 JPH2Q9BR39 696 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 LRRC1Q9BTT6 524 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 AP5M1Q9H0R1 490 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 ADAMTS10Q9H324 1103 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 NXF3Q9H4D5 531 aaKnown RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 PRMT7Q9NVM4 692 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 CHCHD3Q9NX63 227 aaKnown RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 SNTG2Q9NY99 539 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 TJP2Q9UDY2 1190 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 TNFSF13BQ9Y275 285 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 NR2E1Q9Y466 385 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 TMEM88BA6NKF7 163 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 MEIS3P2A8K0S8 358 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 PMM2O15305 246 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 CA12O43570 354 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 HCRTO43612 131 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ZEB2O60315 1214 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 GPR32O75388 356 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 TRPA1O75762 1119 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 SASH3O75995 380 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 KIF4AO95239 1232 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 TMEM253P0C7T8 217 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 MYBL2P10244 700 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 RFX1P22670 979 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 RRM1P23921 792 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 GNA15P30679 374 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 POLR2BP30876 1174 aaKnown RBP5.42□□□□□ -1.54
ATXN3-202ENST00000359366 PEX19P40855 299 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 GCNT1Q02742 428 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 SREBF2Q12772 1141 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 RPS6KA1Q15418 735 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 TMEM92Q6UXU6 159 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 NT5DC3Q86UY8 548 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 SESTD1Q86VW0 696 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 WDR49Q8IV35 697 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 GPR161Q8N6U8 529 aaKnown RBP5.42□□□□□ -1.54
ATXN3-202ENST00000359366 SPATA4Q8NEY3 305 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 RFFLQ8WZ73 363 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 TFAP2BQ92481 460 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ALG3Q92685 438 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ZMAT2Q96NC0 199 aaKnown RBP5.42□□□□□ -1.54
ATXN3-202ENST00000359366 C11orf70Q9BRQ4 267 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 NUP85Q9BW27 656 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 SDCBP2Q9H190 292 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 XYLT2Q9H1B5 865 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 GOLGA2P5Q9HBQ8 144 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 CISHQ9NSE2 258 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 RNF186Q9NXI6 227 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 DMGDHQ9UI17 866 aaKnown RBP5.42□□□□□ -1.54
ATXN3-202ENST00000359366 TSKSQ9UJT2 592 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ANKRD62A6NC57 917 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ERICH4A6NGS2 130 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 O00370 1275 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ASAP2O43150 1006 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 RTN2O75298 545 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ASS1P00966 412 aaKnown RBP5.42□□□□□ -1.54
ATXN3-202ENST00000359366 TNNC2P02585 160 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 HOXD8P13378 290 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-202ENST00000359366 CD19P15391 556 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 GJC1P36383 396 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ASPAP45381 313 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 LACTBP83111 547 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-202ENST00000359366 PURAQ00577 322 aaKnown RBP5.42□□□□□ -1.54
ATXN3-202ENST00000359366 CACNB2Q08289 660 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms