RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 RPS6KA5O75582 802 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 RHOBTB1O94844 696 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 EIF4BP23588 611 aaKnown RBP10.2□□□□□ -0.78
CHD3-202ENST00000358181 TYK2P29597 1187 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 CASP14P31944 242 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 RANBP1P43487 201 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 GPSM2P81274 684 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 RNF19BQ6ZMZ0 732 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 CCDC185Q8N715 623 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 C11orf70Q9BRQ4 267 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 CNPPD1Q9BV87 410 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 NUP85Q9BW27 656 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 WWOXQ9NZC7 414 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 GNA15P30679 374 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 CDK8P49336 464 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 NME5P56597 212 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 PLOD1Q02809 727 aaPredicted RBP10.2□□□□□ -0.78
CHD3-202ENST00000358181 GALNTL6Q49A17 601 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 DGKKQ5KSL6 1271 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 TEDDM1Q5T9Z0 273 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 OLFML2AQ68BL7 652 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 SH3GL3Q99963 347 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 MXD3Q9BW11 206 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 IMPACTQ9P2X3 320 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 GABBR1Q9UBS5 961 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 CTNNAL1Q9UBT7 734 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 PCDHB6Q9Y5E3 794 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 SNTNA6NMZ2 147 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 CCNB2O95067 398 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 PRDX5P30044 214 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 GALNT4Q8N4A0 578 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 CALML6Q8TD86 181 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 SHCBP1LQ9BZQ2 653 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 CHST12Q9NRB3 414 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 PEG3Q9GZU2 1588 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 PALLDQ8WX93 1383 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 TMEM191CA6NGB0 347 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 USP17L5A8MUK1 530 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 SMIM22K7EJ46 135 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 ASS1P00966 412 aaKnown RBP10.2□□□□□ -0.78
CHD3-202ENST00000358181 CTSEP14091 401 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 NPY2RP49146 381 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 CLK2P49760 499 aaKnown RBP10.2□□□□□ -0.78
CHD3-202ENST00000358181 HSD17B4P51659 736 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 RTL3Q8N8U3 475 aaKnown RBP10.2□□□□□ -0.78
CHD3-202ENST00000358181 LIMA1Q9UHB6 759 aaKnown RBP10.2□□□□□ -0.78
CHD3-202ENST00000358181 ADGBQ8N7X0 1667 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 TRIM64BA6NI03 449 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 H7C1W4 665 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 CTIFO43310 598 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 GCLMP48507 274 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 PRKAA1Q13131 559 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 SGCGQ13326 291 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 R3HDM1Q15032 1099 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 BRSK2Q8IWQ3 736 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 DHX36Q9H2U1 1008 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 MAGI2Q86UL8 1455 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 PLXNC1O60486 1568 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 PGRMC1O00264 195 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 KRT75O95678 551 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 GRK3P35626 688 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 ACTN3Q08043 901 aaPredicted RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 GPATCH4Q5T3I0 446 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 EPHX4Q8IUS5 362 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 WDR36Q8NI36 951 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 C18orf25Q96B23 403 aaPredicted RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 ABCG4Q9H172 646 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 SLC35C2Q9NQQ7 365 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 CYP26B1Q9NR63 512 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 AXIN2Q9Y2T1 843 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 PRR36Q9H6K5 1346 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 TCEA3O75764 348 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 STAU1O95793 577 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 LDHAP00338 332 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 ENO1P06733 434 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 ENO3P13929 434 aaPredicted RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 IL6STP40189 918 aaPredicted RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 ZMYM1Q5SVZ6 1142 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 APOA5Q6Q788 366 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 B3GALNT2Q8NCR0 500 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 HASPINQ8TF76 798 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 GAL3ST3Q96A11 431 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 LEMD3Q9Y2U8 911 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 TRIM43BA6NCK2 446 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 EIF2S3P41091 472 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 TAF8Q7Z7C8 310 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 IPMKQ8NFU5 416 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 WDR60Q8WVS4 1066 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 REXO5Q96IC2 774 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 FAM129BQ96TA1 746 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 TSC22D3Q99576 134 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 TMEM260Q9NX78 707 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 PKD2L2Q9NZM6 624 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 PI4KBQ9UBF8 816 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 INSRP06213 1382 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 ITGA4P13612 1032 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 MCAMP43121 646 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 C11orf57Q6ZUT1 292 aaPredicted RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 CERKQ8TCT0 537 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 NLNQ9BYT8 704 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms