RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 LRWD1Q9UFC0 647 aa9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.37□□□□□ -0.91
COL4A3BP-202ENST00000357457 MYBPHLA2RUH7 354 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 FOXD2O60548 495 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 HIP1RO75146 1068 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 MYL4P12829 197 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 GJA1P17302 382 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 CYP3A5P20815 502 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 MARCKSP29966 332 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 WEE1P30291 646 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 LRPAP1P30533 357 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 AARSP49588 968 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 FOSBP53539 338 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 GUCY1B3Q02153 619 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 GPR17Q13304 367 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 SIM2Q14190 667 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 LPAL2Q16609 132 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 DGKKQ5KSL6 1271 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 TTC38Q5R3I4 469 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 RINT1Q6NUQ1 792 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 LONP2Q86WA8 852 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 FBXO18Q8NFZ0 1043 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 SPIRE2Q8WWL2 714 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 KCNN1Q92952 543 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 DRC1Q96MC2 740 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 LRRC3BQ96PB8 259 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 TCHPQ9BT92 498 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 MKNK1Q9BUB5 465 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 DNAJC25Q9H1X3 360 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 PLEKHA5Q9HAU0 1116 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 KMT5AQ9NQR1 393 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 KCNG1Q9UIX4 513 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 DNM3Q9UQ16 869 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 DENND4CQ5VZ89 1909 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 CACNA1GO43497 2377 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 ANK1P16157 1881 aa9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 NUP210Q8TEM1 1887 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 KIF26AQ9ULI4 1882 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-202ENST00000357457 TTC26A0AVF1 554 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 CHURC1-FNTBB4DL54 471 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 E9PMD0 336 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 TM4SF5O14894 197 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 SNPHO15079 494 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 TOM1L1O75674 476 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 ADRB2P07550 413 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 GUCY2CP25092 1073 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 MCM4P33991 863 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 FNTBP49356 437 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 TOB1P50616 345 aaPredicted RBP9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 NEK4P51957 841 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 YWHAHQ04917 246 aaPredicted RBP9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 MCL1Q07820 350 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 DMWDQ09019 674 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 DUSP4Q13115 394 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 PLD1Q13393 1074 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 CCINQ13939 588 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 LRRC32Q14392 662 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 NOLC1Q14978 699 aaKnown RBP eCLIP9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 PPM1JQ5JR12 505 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 CENPPQ6IPU0 288 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 ZPBP2Q6X784 338 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 PRR23CQ6ZRP0 262 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 PRR23BQ6ZRT6 265 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 GAREM2Q75VX8 874 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 RALGPS2Q86X27 583 aaPredicted RBP9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 ARID3BQ8IVW6 561 aaPredicted RBP9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 SYNPOQ8N3V7 929 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 TMEM161BQ8NDZ6 487 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 CSGALNACT1Q8TDX6 532 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 C8orf76Q96K31 380 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 LLPHQ9BRT6 129 aaKnown RBP9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 MMTAG2Q9BU76 263 aaKnown RBP9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 RUSC1Q9BVN2 902 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 TIPINQ9BVW5 301 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 CRISPLD1Q9H336 500 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 OBP2AQ9NY56 170 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 HSFX1Q9UBD0 423 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 YIPF1Q9Y548 306 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 ASB3Q9Y575 518 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 WDFY3Q8IZQ1 3526 aa9.35□□□□□ -0.91
COL4A3BP-202ENST00000357457 SCN1AP35498 2009 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 ZNF638Q14966 1978 aaKnown RBP9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 FRYQ5TBA9 3013 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 A0A1W2PRU2 124 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 OR6C75A6NL08 312 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 SFI1A8K8P3 1242 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 SPECC1L-ADORA2AF8WAN1 911 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 DPYSL4O14531 572 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 SLC16A4O15374 487 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 CLDN3O15551 220 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 GDF9O60383 454 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 MAPTP10636 758 aaKnown RBP9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 CPB1P15086 417 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 TYMPP19971 482 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 U2AF2P26368 475 aaKnown RBP eCLIP9.34□□□□□ -0.917e-12■■■■■ 44.9
COL4A3BP-202ENST00000357457 CTHP32929 405 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 SOX9P48436 509 aa9.34□□□□□ -0.91
COL4A3BP-202ENST00000357457 KPNA1P52294 538 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms