RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 PIRO00625 290 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 MAN2B1O00754 1011 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 NCAM2O15394 837 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 KINO60870 393 aaKnown RBP11.09□□□□□ -0.63
LINC01560-201ENST00000357412 GDI1P31150 447 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 MTAPQ13126 283 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 PLD1Q13393 1074 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 ZC2HC1CQ53FD0 456 aaPredicted RBP11.09□□□□□ -0.63
LINC01560-201ENST00000357412 TSSK4Q6SA08 328 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 USP49Q70CQ1 688 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 MFSD6LQ8IWD5 586 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 KIAA2013Q8IYS2 634 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 DCLK2Q8N568 766 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 TTC9BQ8N6N2 239 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 ZBTB44Q8NCP5 570 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 OR10T2Q8NGX3 314 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 LARP4BQ92615 738 aaKnown RBP11.09□□□□□ -0.63
LINC01560-201ENST00000357412 RUBCNQ92622 972 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 IRF7Q92985 503 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 RMDN1Q96DB5 314 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 BORCS6Q96GS4 357 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 EPSTI1Q96J88 318 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 MKNK1Q9BUB5 465 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 CCSER1Q9C0I3 900 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 IKZF4Q9H2S9 585 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 ST6GALNAC4Q9H4F1 302 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 ZHX3Q9H4I2 956 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 ASB7Q9H672 318 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 PRMT8Q9NR22 394 aaPredicted RBP11.09□□□□□ -0.63
LINC01560-201ENST00000357412 PCDHGA2Q9Y5H1 932 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 OTOGLQ3ZCN5 2332 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 SPTBN4Q9H254 2564 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 HEPACAM2A8MVW5 462 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 ZNF263O14978 683 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 LILRB5O75023 590 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 TBCAO75347 108 aaKnown RBP11.08□□□□□ -0.64
LINC01560-201ENST00000357412 SOAT2O75908 522 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 CYP11A1P05108 521 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 KRT18P05783 430 aaKnown RBP11.08□□□□□ -0.64
LINC01560-201ENST00000357412 PAX3P23760 479 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 ADSSP30520 456 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 ABCD1P33897 745 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 ACOT2P49753 483 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 EPHB3P54753 998 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 CUL4AQ13619 759 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 TMEM132DQ14C87 1099 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 PTPAQ15257 358 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 STXBP5Q5T5C0 1151 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 ADALQ6DHV7 355 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 GAREM2Q75VX8 874 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 ZNF720Q7Z2F6 126 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 ERMP1Q7Z2K6 904 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 DNAJB7Q7Z6W7 309 aaPredicted RBP11.08□□□□□ -0.64
LINC01560-201ENST00000357412 RASSF8Q8NHQ8 419 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 FAM3CQ92520 227 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 PSMG2Q969U7 264 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 LRRC3BQ96PB8 259 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 GPR88Q9GZN0 384 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 CHRDQ9H2X0 955 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 UPF2Q9HAU5 1272 aaKnown RBP11.08□□□□□ -0.64
LINC01560-201ENST00000357412 ZSCAN32Q9NX65 697 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 NDRG2Q9UN36 371 aaKnown RBP11.08□□□□□ -0.64
LINC01560-201ENST00000357412 DERAQ9Y315 318 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 C2CD2Q9Y426 696 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 CLIC4Q9Y696 253 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 PIAS3Q9Y6X2 628 aa11.08□□□□□ -0.64
LINC01560-201ENST00000357412 ARID2Q68CP9 1835 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 DCHS1Q96JQ0 3298 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 PPP1R37O75864 691 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 CENPBP07199 599 aaPredicted RBP11.07□□□□□ -0.64
LINC01560-201ENST00000357412 ODC1P11926 461 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 TDGF1P13385 188 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 ALDH1A3P47895 512 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 MLLT6P55198 1093 aaPredicted RBP11.07□□□□□ -0.64
LINC01560-201ENST00000357412 POU5F1Q01860 360 aaKnown RBP11.07□□□□□ -0.64
LINC01560-201ENST00000357412 FCHO2Q0JRZ9 810 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 SLFN12LQ6IEE8 588 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 ARMCX5Q6P1M9 558 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 CRELD2Q6UXH1 353 aaPredicted RBP11.07□□□□□ -0.64
LINC01560-201ENST00000357412 KRI1Q8N9T8 703 aaKnown RBP11.07□□□□□ -0.64
LINC01560-201ENST00000357412 ATRIPQ8WXE1 791 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 E2F7Q96AV8 911 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 HINFPQ9BQA5 517 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 STRA6Q9BX79 667 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 ZCWPW1Q9H0M4 648 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 ATXN3LQ9H3M9 355 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 SLITRK6Q9H5Y7 841 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 LMAN1LQ9HAT1 526 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 HSFX1Q9UBD0 423 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 FBXO2Q9UK22 296 aaPredicted RBP11.07□□□□□ -0.64
LINC01560-201ENST00000357412 AGO2Q9UKV8 859 aaKnown RBP11.07□□□□□ -0.64
LINC01560-201ENST00000357412 ASB3Q9Y575 518 aa11.07□□□□□ -0.64
LINC01560-201ENST00000357412 DNAH14Q0VDD8 3507 aa11.06□□□□□ -0.64
LINC01560-201ENST00000357412 PLXNA3P51805 1871 aa11.06□□□□□ -0.64
LINC01560-201ENST00000357412 COL4A3Q01955 1670 aa11.06□□□□□ -0.64
LINC01560-201ENST00000357412 CHADO15335 359 aa11.06□□□□□ -0.64
LINC01560-201ENST00000357412 CHRNB1P11230 501 aa11.06□□□□□ -0.64
LINC01560-201ENST00000357412 ATF6P18850 670 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms