RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 RCAN1P53805 252 aa16.8■□□□□ 0.28
RXRA-201ENST00000356384 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■■■■■ 56.3
RXRA-201ENST00000356384 C11orf96Q7Z7L8 435 aa16.8■□□□□ 0.28
RXRA-201ENST00000356384 RPAP3Q9H6T3 665 aaPredicted RBP16.8■□□□□ 0.28
RXRA-201ENST00000356384 TOMM70O94826 608 aa16.8■□□□□ 0.28
RXRA-201ENST00000356384 EPB42P16452 691 aa16.8■□□□□ 0.28
RXRA-201ENST00000356384 KCNK10P57789 538 aa16.8■□□□□ 0.28
RXRA-201ENST00000356384 CLEC4GQ6UXB4 293 aa16.8■□□□□ 0.28
RXRA-201ENST00000356384 TMEM143Q96AN5 459 aa16.8■□□□□ 0.28
RXRA-201ENST00000356384 CHP1Q99653 195 aa16.8■□□□□ 0.28
RXRA-201ENST00000356384 USP6P35125 1406 aa16.8■□□□□ 0.28
RXRA-201ENST00000356384 AFF2P51816 1311 aa16.8■□□□□ 0.28
RXRA-201ENST00000356384 GLI2P10070 1586 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 CYP2C19P33261 490 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 SLC18A3Q16572 532 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 DPF2Q92785 391 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 VPS50Q96JG6 964 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 UVRAGQ9P2Y5 699 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 SLC16A3O15427 465 aaKnown RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 CLASP2O75122 1294 aaKnown RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 TADA2AO75478 443 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 TXNP10599 105 aaKnown RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 SERPINB3P29508 390 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 SLC16A1P53985 500 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 RBP5P82980 135 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 CCDC15Q0P6D6 951 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 TWF1Q12792 350 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 LRIG3Q6UXM1 1119 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 HDDC2Q7Z4H3 204 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 LDHDQ86WU2 507 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 HS6ST3Q8IZP7 471 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 SPRP35270 261 aaPredicted RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 NLRP11P59045 1033 aaKnown RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 NCALDP61601 193 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 PRPF39Q86UA1 669 aaKnown RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 OR6J1Q8NGC5 347 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 XPO6Q96QU8 1125 aaKnown RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 MED15Q96RN5 788 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 STK33Q9BYT3 514 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 TUFT1Q9NNX1 390 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 GID8Q9NWU2 228 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 TSC22D4Q9Y3Q8 395 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 LOC100653049A0A140TA62 436 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 KRT34O76011 436 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 TMED10P49755 219 aaKnown RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 MTFR1Q15390 333 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 GJC2Q5T442 439 aaPredicted RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 PODNQ7Z5L7 613 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 ZNF280CQ8ND82 737 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 DNAJC9Q8WXX5 260 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 RUBCNQ92622 972 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 WDR35Q9P2L0 1181 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 CAMSAP1Q5T5Y3 1602 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 UBXN8O00124 270 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 HOXD10P28358 340 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 IPMKQ8NFU5 416 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 SGSM3Q96HU1 749 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 SEC16BQ96JE7 1060 aa16.79■□□□□ 0.28
RXRA-201ENST00000356384 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 NFKBIL1Q9UBC1 381 aaPredicted RBP16.79■□□□□ 0.28
RXRA-201ENST00000356384 ASB14A6NK59 587 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 SERPINB1P30740 379 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 SMIM5Q71RC9 77 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 KIRREL3Q8IZU9 778 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 RBBP8NLQ8NC74 664 aaPredicted RBP16.78■□□□□ 0.28
RXRA-201ENST00000356384 TADA1Q96BN2 335 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 NSMCE4AQ9NXX6 385 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 CTSHP09668 335 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 C3orf62Q6ZUJ4 267 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 SCFD2Q8WU76 684 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 CELF1Q92879 486 aaKnown RBP16.78■□□□□ 0.28
RXRA-201ENST00000356384 EIF3HO15372 352 aaKnown RBP eCLIP16.78■□□□□ 0.28
RXRA-201ENST00000356384 NCOA4Q13772 614 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 TMEM132DQ14C87 1099 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 PNMA8BQ9ULN7 279 aaPredicted RBP16.78■□□□□ 0.28
RXRA-201ENST00000356384 PAIP2BQ9ULR5 123 aaKnown RBP16.78■□□□□ 0.28
RXRA-201ENST00000356384 MTO1Q9Y2Z2 717 aaKnown RBP16.78■□□□□ 0.28
RXRA-201ENST00000356384 ALKQ9UM73 1620 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 CPA2P48052 419 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 RGS4P49798 205 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 KCNB1Q14721 858 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 DAB2IPQ5VWQ8 1189 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 LUZP2Q86TE4 346 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 APOBEC3FQ8IUX4 373 aaKnown RBP16.78■□□□□ 0.28
RXRA-201ENST00000356384 DTNBP1Q96EV8 351 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 CNDP1Q96KN2 507 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 SEPT5Q99719 369 aaPredicted RBP16.78■□□□□ 0.28
RXRA-201ENST00000356384 CAPN10Q9HC96 672 aa16.78■□□□□ 0.28
RXRA-201ENST00000356384 RPS6KA4O75676 772 aa16.77■□□□□ 0.28
RXRA-201ENST00000356384 AKR1B1P15121 316 aa16.77■□□□□ 0.28
RXRA-201ENST00000356384 PIGHQ14442 188 aaPredicted RBP16.77■□□□□ 0.28
RXRA-201ENST00000356384 AASDHQ4L235 1098 aaPredicted RBP16.77■□□□□ 0.28
RXRA-201ENST00000356384 SLC30A9Q6PML9 568 aa16.77■□□□□ 0.28
RXRA-201ENST00000356384 KRT35Q92764 455 aa16.77■□□□□ 0.28
RXRA-201ENST00000356384 SMARCAL1Q9NZC9 954 aa16.77■□□□□ 0.28
RXRA-201ENST00000356384 MPP6Q9NZW5 540 aa16.77■□□□□ 0.28
RXRA-201ENST00000356384 BCORL1Q5H9F3 1711 aa16.77■□□□□ 0.28
RXRA-201ENST00000356384 CLTCQ00610 1675 aaKnown RBP16.77■□□□□ 0.28
RXRA-201ENST00000356384 MZF1P28698 734 aaPredicted RBP16.77■□□□□ 0.28
RXRA-201ENST00000356384 ETFBP38117 255 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms