RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CCDC60Q8IWA6 550 aaPredicted RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 PIGBQ92521 554 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 NSL1Q96IY1 281 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 CNDP1Q96KN2 507 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 JPH1Q9HDC5 661 aaPredicted RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 APPL1Q9UKG1 709 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 PALLDQ8WX93 1383 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 SMAPO00193 183 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 CAND2O75155 1236 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 APOA4P06727 396 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 PCSK7Q16549 785 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 TRIM71Q2Q1W2 868 aaKnown RBP15.55■□□□□ 0.08
LMX1B-201ENST00000355497 CCDC81Q6ZN84 652 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 RIBC1Q8N443 379 aaPredicted RBP15.55■□□□□ 0.08
LMX1B-201ENST00000355497 VPS37AQ8NEZ2 397 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 C9orf72Q96LT7 481 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 NDEL1Q9GZM8 345 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 GRID1Q9ULK0 1009 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 ANKARQ7Z5J8 1434 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 E2F8A0AVK6 867 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 EVPLLA8MZ36 301 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 F5H6K3 240 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 USP1O94782 785 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 GALCP54803 685 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 KLRC3Q07444 240 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 KYNUQ16719 465 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 SLC25A41Q8N5S1 370 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 PABPC5Q96DU9 382 aaKnown RBP15.55■□□□□ 0.08
LMX1B-201ENST00000355497 ALBP02768 609 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 HOXD10P28358 340 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 ALX1Q15699 326 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.55■□□□□ 0.08
LMX1B-201ENST00000355497 MINPP1Q9UNW1 487 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 MLNP12872 115 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 PDIA5Q14554 519 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 ZNF772Q68DY9 489 aaPredicted RBP15.55■□□□□ 0.08
LMX1B-201ENST00000355497 ARHGAP17Q68EM7 881 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 CCDC103Q8IW40 242 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 PIM2Q9P1W9 311 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 ITIH6Q6UXX5 1313 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 DLGAP3O95886 979 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 HMBSP08397 361 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 BTKQ06187 659 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 MAPRE1Q15691 268 aaKnown RBP15.55■□□□□ 0.08
LMX1B-201ENST00000355497 TTC33Q6PID6 262 aaPredicted RBP15.55■□□□□ 0.08
LMX1B-201ENST00000355497 CD209Q9NNX6 404 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 MAGI2Q86UL8 1455 aa15.55■□□□□ 0.08
LMX1B-201ENST00000355497 TRPC5OSA6NMA1 111 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 MAGEA4P43358 317 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 TMEM132DQ14C87 1099 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 CCNI2Q6ZMN8 369 aaPredicted RBP15.54■□□□□ 0.08
LMX1B-201ENST00000355497 ATF5Q9Y2D1 282 aaPredicted RBP15.54■□□□□ 0.08
LMX1B-201ENST00000355497 CSTF3Q12996 717 aaKnown RBP15.54■□□□□ 0.08
LMX1B-201ENST00000355497 PTK6Q13882 451 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 SGSM1Q2NKQ1 1148 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 RBBP8NLQ8NC74 664 aaPredicted RBP15.54■□□□□ 0.08
LMX1B-201ENST00000355497 E2F7Q96AV8 911 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 APOL5Q9BWW9 433 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.54■□□□□ 0.08
LMX1B-201ENST00000355497 V9GYQ6 96 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 TMEM120BA0PK00 339 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 SRGNP10124 158 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 RXRBP28702 533 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 MRPS35P82673 323 aaKnown RBP15.54■□□□□ 0.08
LMX1B-201ENST00000355497 CDC42EP1Q00587 391 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 PDK1Q15118 436 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 CHI3L2Q15782 390 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 CATSPERBQ9H7T0 1116 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 SNX9Q9Y5X1 595 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 A0A1B0GTH6 734 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 SSU72P8A0A1W2PR75 194 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 LTKP29376 864 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 CENPCQ03188 943 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 KIF2BQ8N4N8 673 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 ALDH8A1Q9H2A2 487 aaPredicted RBP15.54■□□□□ 0.08
LMX1B-201ENST00000355497 PLEKHG2Q9H7P9 1386 aa15.54■□□□□ 0.08
LMX1B-201ENST00000355497 VHLP40337 213 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 FMO5P49326 533 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 STAT5BP51692 787 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 C3orf62Q6ZUJ4 267 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 FGD2Q7Z6J4 655 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 C11orf74Q86VG3 221 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 JAMLQ86YT9 394 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 OR6J1Q8NGC5 347 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 OR2W6PQ8NHA6 318 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
LMX1B-201ENST00000355497 MMP10P09238 476 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 SGO1Q5FBB7 561 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 PIK3R5Q8WYR1 880 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 BRD8Q9H0E9 1235 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 DMAP1Q9NPF5 467 aaPredicted RBP15.53■□□□□ 0.08
LMX1B-201ENST00000355497 PAPOLBQ9NRJ5 636 aaKnown RBP15.53■□□□□ 0.08
LMX1B-201ENST00000355497 CACNA2D2Q9NY47 1150 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 SPP2Q13103 211 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 HLFQ16534 295 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 C4orf22Q6V702 233 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 ASZ1Q8WWH4 475 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 DOLKQ9UPQ8 538 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 PGK2P07205 417 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 DSG1Q02413 1049 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms