RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 NR1H3Q13133 447 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 CAPSQ13938 189 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 PIGHQ14442 188 aaPredicted RBP16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 LONRF1Q17RB8 773 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 DUOXA2Q1HG44 320 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 SWT1Q5T5J6 900 aaKnown RBP16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 IZUMO3Q5VZ72 239 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 HIBCHQ6NVY1 386 aaPredicted RBP16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 ZCCHC9Q8N567 271 aaKnown RBP16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 OR5B17Q8NGF7 314 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 SEPT1Q8WYJ6 367 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 TTC25Q96NG3 672 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 HEMGNQ9BXL5 484 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 CCDC113Q9H0I3 377 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 NINJ2Q9NZG7 142 aa16.39■□□□□ 0.21
TNFSF13-202ENST00000349228 EIF4BP23588 611 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 SSR1P43307 286 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 MXD4Q14582 209 aaPredicted RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 KYNUQ16719 465 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 ANGEL2Q5VTE6 544 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 SEPT14Q6ZU15 432 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 GSTA5Q7RTV2 222 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 PHLDB2Q86SQ0 1253 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 RIOX2Q8IUF8 465 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 PASD1Q8IV76 773 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 DYDC1Q8WWB3 177 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 FAXDC2Q96IV6 333 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 FRMD8P1Q9BZ68 369 aaPredicted RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 C2orf40Q9H1Z8 148 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 PPCSQ9HAB8 311 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 PCDHGC3Q9UN70 934 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 DNM1LO00429 736 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 OGTO15294 1046 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 FARP2O94887 1054 aaPredicted RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 SIP14410 1827 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 UBA1P22314 1058 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 SCTRP47872 440 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 EAPPQ56P03 285 aaPredicted RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 KIAA1217Q5T5P2 1943 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 UBAP2Q5T6F2 1119 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 NIPA2Q8N8Q9 360 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 FAM212AQ96EL1 285 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 CFAP57Q96MR6 1250 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 MPHOSPH6Q99547 160 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 JPH2Q9BR39 696 aaPredicted RBP16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 NIF3L1Q9GZT8 377 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 EFR3BQ9Y2G0 817 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 CEP83Q9Y592 693 aa16.38■□□□□ 0.21
TNFSF13-202ENST00000349228 ZNFX1Q9P2E3 1918 aaKnown RBP16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 COL11A1P12107 1806 aaPredicted RBP16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 TMEM120BA0PK00 339 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 LIASO43766 372 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 CFHP08603 1231 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 XRCC4Q13426 336 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 LLGL1Q15334 1064 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 ZBTB41Q5SVQ8 909 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 CDCA2Q69YH5 1023 aaPredicted RBP16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 DNAJC24Q6P3W2 148 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 KCNV1Q6PIU1 500 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 PPP1R21Q6ZMI0 780 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 ARHGEF18Q6ZSZ5 1173 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 ZBTB8OSQ8IWT0 167 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 FAM84AQ96KN4 292 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 SLITRK1Q96PX8 696 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 PCYT2Q99447 389 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 SLC40A1Q9NP59 571 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 KLC4Q9NSK0 619 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 STRIP2Q9ULQ0 834 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 USTQ9Y2C2 406 aa16.37■□□□□ 0.21
TNFSF13-202ENST00000349228 TCRBV5S1A1TA0A578 114 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 MSCO60682 206 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 TRIP13Q15645 432 aaPredicted RBP16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 C2CD6Q53TS8 623 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 LLGL2Q6P1M3 1020 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 METTL7BQ6UX53 244 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 ANKS1BQ7Z6G8 1248 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 CKAP2Q8WWK9 683 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 PRPF31Q8WWY3 499 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 ACO2Q99798 780 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 ELAC2Q9BQ52 826 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 TCHPQ9BT92 498 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 UBN1Q9NPG3 1134 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 DNALI1O14645 258 aaPredicted RBP16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 FAM189A1O60320 539 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 CD58P19256 250 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 POLR2BP30876 1174 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 MAGEA4P43358 317 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 CNTN2Q02246 1040 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 PPARDQ03181 441 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 TRPC3Q13507 836 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 DCUN1D2Q6PH85 259 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 VSTM1Q6UX27 236 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 POLNQ7Z5Q5 900 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 TDRPQ86YL5 185 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 GBP7Q8N8V2 638 aaPredicted RBP16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 NKIRAS1Q9NYS0 192 aa16.36■□□□□ 0.21
TNFSF13-202ENST00000349228 LOC285556D6RIA3 1793 aa16.35■□□□□ 0.21
TNFSF13-202ENST00000349228 SNX3O60493 162 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms