RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 HEXIM2Q96MH2 286 aaKnown RBP14.75□□□□□ -0.05
TRIM4-201ENST00000349062 CDT1Q9H211 546 aa14.75□□□□□ -0.05
TRIM4-201ENST00000349062 SEMA4AQ9H3S1 761 aa14.75□□□□□ -0.05
TRIM4-201ENST00000349062 TBK1Q9UHD2 729 aa14.75□□□□□ -0.05
TRIM4-201ENST00000349062 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.75□□□□□ -0.05
TRIM4-201ENST00000349062 CNTNAP2Q9UHC6 1331 aa14.75□□□□□ -0.05
TRIM4-201ENST00000349062 MIF4GDA9UHW6 222 aaKnown RBP14.74□□□□□ -0.05
TRIM4-201ENST00000349062 ZBTB42B2RXF5 422 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 GOLGA8MH3BSY2 632 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 PIAS1O75925 651 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 STAG3L1P0CL83 205 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 CYP2B6P20813 491 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 POLR2BP30876 1174 aaKnown RBP14.74□□□□□ -0.05
TRIM4-201ENST00000349062 EFNA5P52803 228 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 CALCOCO2Q13137 446 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 TFDP1Q14186 410 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 JADE1Q6IE81 842 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 ERICH1Q86X53 443 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 ABRAQ8N0Z2 381 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 MSL3Q8N5Y2 521 aaKnown RBP14.74□□□□□ -0.05
TRIM4-201ENST00000349062 PIK3R5Q8WYR1 880 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 CABS1Q96KC9 395 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 LPIN3Q9BQK8 851 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 WNT8AQ9H1J5 351 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.74□□□□□ -0.05
TRIM4-201ENST00000349062 H3BRB1 525 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 HGSO14964 777 aaPredicted RBP14.74□□□□□ -0.05
TRIM4-201ENST00000349062 KRT1P04264 644 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 NR1D1P20393 614 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 BPIFB4P59827 614 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 MAGOHP61326 146 aaKnown RBP14.74□□□□□ -0.05
TRIM4-201ENST00000349062 CUL1Q13616 776 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 ZNF667Q5HYK9 610 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 BRSK2Q8IWQ3 736 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 SLITRK6Q9H5Y7 841 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 TUT1Q9H6E5 874 aaKnown RBP14.74□□□□□ -0.05
TRIM4-201ENST00000349062 RRAGCQ9HB90 399 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 FAM49BQ9NUQ9 324 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 MAPK13O15264 365 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 PHF2O75151 1096 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 EDNRBP24530 442 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 ECHS1P30084 290 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 PEX5P50542 639 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 ALS2CLQ60I27 953 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 CYP4F22Q6NT55 531 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 MPZL3Q6UWV2 235 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 RASGEF1CQ8N431 466 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 CAVIN3Q969G5 261 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 CALR3Q96L12 384 aaKnown RBP14.74□□□□□ -0.05
TRIM4-201ENST00000349062 ZNF148Q9UQR1 794 aa14.74□□□□□ -0.05
TRIM4-201ENST00000349062 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.74□□□□□ -0.05
TRIM4-201ENST00000349062 HBP1O60381 514 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 ECEL1O95672 775 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 CYP1A2P05177 515 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 ZSCAN5DPP0CG00 497 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 ACO1P21399 889 aaKnown RBP14.73□□□□□ -0.05
TRIM4-201ENST00000349062 RTP1P59025 263 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 BEX3Q00994 111 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 SLC29A2Q14542 456 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 DENND1BQ6P3S1 775 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 KIRREL3Q8IZU9 778 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 OR6J1Q8NGC5 347 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 BRI3BPQ8WY22 251 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 OSMRQ99650 979 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 TRIM6Q9C030 488 aaPredicted RBP14.73□□□□□ -0.05
TRIM4-201ENST00000349062 UVRAGQ9P2Y5 699 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 UNGP13051 313 aaPredicted RBP14.73□□□□□ -0.05
TRIM4-201ENST00000349062 ETS1P14921 441 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 LSP1P33241 339 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 COILP38432 576 aaPredicted RBP14.73□□□□□ -0.05
TRIM4-201ENST00000349062 IFNAR2P48551 515 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 NOMO3P69849 1222 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 CCNA1P78396 465 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 ADCY2Q08462 1091 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 MAMLD1Q13495 774 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 SCYL2Q6P3W7 929 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 IQCKQ8N0W5 287 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 C12orf29Q8N999 325 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 NIF3L1Q9GZT8 377 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 YY1AP1Q9H869 796 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 CEP83Q9Y592 693 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 AKAP5P24588 427 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 C11orf63Q6NUN7 778 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 ZNF365Q70YC5 407 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.73□□□□□ -0.05
TRIM4-201ENST00000349062 HSPH1Q92598 858 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 DDX23Q9BUQ8 820 aaKnown RBP14.73□□□□□ -0.05
TRIM4-201ENST00000349062 PCDHA3Q9Y5H8 950 aa14.73□□□□□ -0.05
TRIM4-201ENST00000349062 RLFQ13129 1914 aa14.72□□□□□ -0.05
TRIM4-201ENST00000349062 GRIN2DO15399 1336 aa14.72□□□□□ -0.05
TRIM4-201ENST00000349062 IGKV6D-21A0A0A0MT36 114 aa14.72□□□□□ -0.05
TRIM4-201ENST00000349062 MEFVO15553 781 aaPredicted RBP14.72□□□□□ -0.05
TRIM4-201ENST00000349062 ZNF200P98182 395 aaPredicted RBP14.72□□□□□ -0.05
TRIM4-201ENST00000349062 DENND2CQ68D51 928 aa14.72□□□□□ -0.05
TRIM4-201ENST00000349062 TMC3Q7Z5M5 1100 aa14.72□□□□□ -0.05
TRIM4-201ENST00000349062 KIF12Q96FN5 646 aa14.72□□□□□ -0.05
TRIM4-201ENST00000349062 MROH8Q9H579 483 aa14.72□□□□□ -0.05
TRIM4-201ENST00000349062 FAM114A2Q9NRY5 505 aa14.72□□□□□ -0.05
TRIM4-201ENST00000349062 RGPD3A6NKT7 1758 aaPredicted RBP14.72□□□□□ -0.05
TRIM4-201ENST00000349062 RGPD4Q7Z3J3 1758 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms