RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 RAB3IL1Q8TBN0 382 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 TCP10LQ8TDR4 215 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 GATA6Q92908 595 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
PTBP1-201ENST00000349038 MAK16Q9BXY0 300 aaKnown RBP16■□□□□ 0.15
PTBP1-201ENST00000349038 NMUR2Q9GZQ4 415 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 ZBTB21Q9ULJ3 1066 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 SBF2Q86WG5 1849 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 PCNTO95613 3336 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 CDK5RAP2Q96SN8 1893 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 E7ENQ6 273 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 SLC26A4O43511 780 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 ASMTLO95671 621 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 FAM163BP0C2L3 166 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 SNHG28P0DPA3 235 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 RALAP11233 206 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 BGNP21810 368 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 FMO5P49326 533 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 NCOA4Q13772 614 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 MARK2Q7KZI7 788 aaKnown RBP16■□□□□ 0.15
PTBP1-201ENST00000349038 PASD1Q8IV76 773 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 ENDOVQ8N8Q3 282 aaKnown RBP16■□□□□ 0.15
PTBP1-201ENST00000349038 MTBPQ96DY7 904 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 SIKE1Q9BRV8 207 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 TMOD2Q9NZR1 351 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 LARSQ9P2J5 1176 aaKnown RBP16■□□□□ 0.15
PTBP1-201ENST00000349038 FRMD4BQ9Y2L6 1034 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 STARD13Q9Y3M8 1113 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 RGL2O15211 777 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 PPP1R11O60927 126 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-201ENST00000349038 ANPEPP15144 967 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 TM4SF1P30408 202 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 SLC12A3P55017 1021 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 AP1B1Q10567 949 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 PDIA2Q13087 525 aaKnown RBP15.99■□□□□ 0.15
PTBP1-201ENST00000349038 SLC47A2Q86VL8 602 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 FAM111AQ96PZ2 611 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 PCYOX1Q9UHG3 505 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 FOXD2O60548 495 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-201ENST00000349038 MAPK4P31152 587 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 HOXD13P35453 343 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 MSX2P35548 267 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-201ENST00000349038 BTDP43251 543 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 C1QTNF12Q5T7M4 302 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 TIPINQ9BVW5 301 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 TSSK1BQ9BXA7 367 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 KLHL4Q9C0H6 718 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 ANLNQ9NQW6 1124 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 ANKFY1Q9P2R3 1169 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 TNRC6CQ9HCJ0 1690 aaKnown RBP15.99■□□□□ 0.15
PTBP1-201ENST00000349038 PLIN4Q96Q06 1357 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 DDX39AO00148 427 aaKnown RBP15.99■□□□□ 0.15
PTBP1-201ENST00000349038 PEX1O43933 1283 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 ITGA2BP08514 1039 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 DLG1Q12959 904 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 CDC16Q13042 620 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 MOGSQ13724 837 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 CATSPER3Q86XQ3 398 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 ARHGEF19Q8IW93 802 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 NAT14Q8WUY8 206 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 ECSITQ9BQ95 431 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 MECRQ9BV79 373 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 LRRC4BQ9NT99 713 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 ANGPTL2Q9UKU9 493 aa15.99■□□□□ 0.15
PTBP1-201ENST00000349038 FAF1Q9UNN5 650 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-201ENST00000349038 FCHO1O14526 889 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 ADARP55265 1226 aaKnown RBP15.98■□□□□ 0.15
PTBP1-201ENST00000349038 GPS1Q13098 491 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 TTLL12Q14166 644 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-201ENST00000349038 PPP6R3Q5H9R7 873 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-201ENST00000349038 TMCO4Q5TGY1 634 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 SDCCAG8Q86SQ7 713 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-201ENST00000349038 CTAGE3PQ8IX95 158 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 GJD4Q96KN9 370 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-201ENST00000349038 STK33Q9BYT3 514 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 SLC13A1Q9BZW2 595 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 NYXQ9GZU5 481 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 PSTPIP2Q9H939 334 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 GINM1Q9NU53 330 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 PHF24Q9UPV7 400 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 NEU2Q9Y3R4 380 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 NCANO14594 1321 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 PNMA6FA0A0J9YX94 578 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 DRG2P55039 364 aaKnown RBP15.98■□□□□ 0.15
PTBP1-201ENST00000349038 SLC25A3Q00325 362 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 R3HDM1Q15032 1099 aaKnown RBP15.98■□□□□ 0.15
PTBP1-201ENST00000349038 ATP13A4Q4VNC1 1196 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 TCHHL1Q5QJ38 904 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-201ENST00000349038 ZNF804AQ7Z570 1209 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 RHOT2Q8IXI1 618 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 LINC00116Q8NCU8 138 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 CNKSR2Q8WXI2 1034 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 DHX38Q92620 1227 aaKnown RBP15.98■□□□□ 0.15
PTBP1-201ENST00000349038 PCDHB18PQ96TA0 734 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 FHDC1Q9C0D6 1143 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-201ENST00000349038 TMEM117Q9H0C3 514 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 JMJD4Q9H9V9 463 aa15.98■□□□□ 0.15
PTBP1-201ENST00000349038 SIGLEC16A6NMB1 481 aa15.97■□□□□ 0.15
PTBP1-201ENST00000349038 ZMPSTE24O75844 475 aa15.97■□□□□ 0.15
PTBP1-201ENST00000349038 IMPDH2P12268 514 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms