RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PTPN21Q16825 1174 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 SLC5A9Q2M3M2 681 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 CTXN3Q4LDR2 81 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 C11orf57Q6ZUT1 292 aaPredicted RBP17.37■□□□□ 0.37
RAB5C-201ENST00000346213 HFE2Q6ZVN8 426 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 LUZP1Q86V48 1076 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
RAB5C-201ENST00000346213 BEST2Q8NFU1 509 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 ITFG1Q8TB96 612 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 NOC3LQ8WTT2 800 aaKnown RBP17.37■□□□□ 0.37
RAB5C-201ENST00000346213 ASIC4Q96FT7 647 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 RHOBTB2Q9BYZ6 727 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 MTMR12Q9C0I1 747 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 DNMT3BQ9UBC3 853 aaKnown RBP17.37■□□□□ 0.37
RAB5C-201ENST00000346213 EXOC7Q9UPT5 735 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 PVALEFA0A1B0GWK0 134 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 OAZ2O95190 189 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 DPYDQ12882 1025 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 CCDC149Q6ZUS6 474 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 CD302Q8IX05 232 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 GPD1LQ8N335 351 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 TDRD5Q8NAT2 981 aaKnown RBP17.36■□□□□ 0.37
RAB5C-201ENST00000346213 EDAQ92838 391 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 TMEM206Q9H813 350 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 DOCK8Q8NF50 2099 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 ITGB3P05106 788 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 POLR2BP30876 1174 aaKnown RBP17.36■□□□□ 0.37
RAB5C-201ENST00000346213 CCR2P41597 374 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 AMPD3Q01432 767 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 POSTNQ15063 836 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 HS1BP3Q53T59 392 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 TMEM31Q5JXX7 168 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 GET4Q7L5D6 327 aaPredicted RBP17.36■□□□□ 0.37
RAB5C-201ENST00000346213 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 ZDHHC14Q8IZN3 488 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 ELMO3Q96BJ8 720 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 PGLYRP2Q96PD5 576 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 NAT10Q9H0A0 1025 aaKnown RBP17.36■□□□□ 0.37
RAB5C-201ENST00000346213 KCTD10Q9H3F6 313 aa17.36■□□□□ 0.37
RAB5C-201ENST00000346213 NARSO43776 548 aaKnown RBP17.35■□□□□ 0.37
RAB5C-201ENST00000346213 SOAT2O75908 522 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 ADCY5O95622 1261 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 CYP2J2P51589 502 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 TFAMQ00059 246 aaKnown RBP17.35■□□□□ 0.37
RAB5C-201ENST00000346213 PPM1LQ5SGD2 360 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 RDH13Q8NBN7 331 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 ZNF461Q8TAF7 563 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 ZNF516Q92618 1163 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 CCDC34Q96HJ3 373 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 BPIFA3Q9BQP9 254 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 PYM1Q9BRP8 204 aaKnown RBP17.35■□□□□ 0.37
RAB5C-201ENST00000346213 RPP25Q9BUL9 199 aaKnown RBP17.35■□□□□ 0.37
RAB5C-201ENST00000346213 C1QTNF1Q9BXJ1 281 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 LRRC27Q9C0I9 530 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 CEP72Q9P209 647 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 USTQ9Y2C2 406 aa17.35■□□□□ 0.37
RAB5C-201ENST00000346213 IL18RAPO95256 599 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 ALADP13716 330 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 ATF2P15336 505 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 COL9A1P20849 921 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 CASP4P49662 377 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 POU5F1Q01860 360 aaKnown RBP17.34■□□□□ 0.37
RAB5C-201ENST00000346213 YWHAHQ04917 246 aaPredicted RBP17.34■□□□□ 0.37
RAB5C-201ENST00000346213 PNOCQ13519 176 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 WSCD1Q658N2 575 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 ZNF280DQ6N043 979 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 PDXDC1Q6P996 788 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 DSTYKQ6XUX3 929 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 LRRTM3Q86VH5 581 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 OSTM1Q86WC4 334 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 TCEAL4Q96EI5 215 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 TMLHEQ9NVH6 421 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 NME7Q9Y5B8 376 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 INSL5Q9Y5Q6 135 aa17.34■□□□□ 0.37
RAB5C-201ENST00000346213 ARHGEF37A1IGU5 675 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 TULP1O00294 542 aaPredicted RBP17.33■□□□□ 0.37
RAB5C-201ENST00000346213 AP5Z1O43299 807 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 RPN1P04843 607 aaKnown RBP17.33■□□□□ 0.37
RAB5C-201ENST00000346213 CYP11A1P05108 521 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 HOXA9P31269 272 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 ADCY1Q08828 1119 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 IER5LQ5T953 404 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 LIN9Q5TKA1 542 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 TRIM67Q6ZTA4 783 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 HS6ST3Q8IZP7 471 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 ING5Q8WYH8 240 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 TSPAN18Q96SJ8 248 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 L1RE1Q9UN81 338 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 AGAP1Q9UPQ3 857 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 NR2E1Q9Y466 385 aa17.33■□□□□ 0.37
RAB5C-201ENST00000346213 NCANO14594 1321 aa17.33■□□□□ 0.36
RAB5C-201ENST00000346213 UBE4BO95155 1302 aa17.33■□□□□ 0.36
RAB5C-201ENST00000346213 MOSPD3O75425 235 aa17.32■□□□□ 0.36
RAB5C-201ENST00000346213 HNRNPA1P09651 372 aaKnown RBP eCLIP17.32■□□□□ 0.36
RAB5C-201ENST00000346213 TYMPP19971 482 aa17.32■□□□□ 0.36
RAB5C-201ENST00000346213 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
RAB5C-201ENST00000346213 KNOP1Q1ED39 458 aaKnown RBP17.32■□□□□ 0.36
RAB5C-201ENST00000346213 OVOS1Q6IE37 1185 aa17.32■□□□□ 0.36
RAB5C-201ENST00000346213 TCEAL8Q8IYN2 117 aa17.32■□□□□ 0.36
RAB5C-201ENST00000346213 SMYD4Q8IYR2 804 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms