RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 KPNA7A9QM74 516 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 SEC24AO95486 1093 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 CYP11A1P05108 521 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 PTPN2P17706 415 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 POLR2BP30876 1174 aaKnown RBP17.34■□□□□ 0.37
ATG4B-201ENST00000344376 HOXD13P35453 343 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 PSMD2Q13200 908 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 GPR17Q13304 367 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 PLD1Q13393 1074 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 IQCEQ6IPM2 695 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 RNF19BQ6ZMZ0 732 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 THEM5Q8N1Q8 247 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 FSIP1Q8NA03 581 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 GOLGA5Q8TBA6 731 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 CCDC47Q96A33 483 aaKnown RBP17.34■□□□□ 0.37
ATG4B-201ENST00000344376 ASIC4Q96FT7 647 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 CCDC34Q96HJ3 373 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 PDE11AQ9HCR9 933 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 HCFC1R1Q9NWW0 138 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 DNMT3BQ9UBC3 853 aaKnown RBP17.34■□□□□ 0.37
ATG4B-201ENST00000344376 AGAP1Q9UPQ3 857 aa17.34■□□□□ 0.37
ATG4B-201ENST00000344376 MRPS23Q9Y3D9 190 aaKnown RBP17.34■□□□□ 0.37
ATG4B-201ENST00000344376 FAM237AA0A1B0GTK4 181 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 ITGB3P05106 788 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 RHOP08100 348 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 KRT19P08727 400 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 CYP2J2P51589 502 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 NDUFA8P51970 172 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 WNT7BP56706 349 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 RBP5P82980 135 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 KNOP1Q1ED39 458 aaKnown RBP17.33■□□□□ 0.37
ATG4B-201ENST00000344376 CBWD2Q8IUF1 395 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 FBXL6Q8N531 539 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 CSGALNACT2Q8N6G5 542 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 LRRC52Q8N7C0 313 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 C1orf127Q8N9H9 656 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 FGF13Q92913 245 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 MTMR12Q9C0I1 747 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 AVENQ9NQS1 362 aaPredicted RBP17.33■□□□□ 0.37
ATG4B-201ENST00000344376 DUSP12Q9UNI6 340 aa17.33■□□□□ 0.37
ATG4B-201ENST00000344376 ARIH1Q9Y4X5 557 aaPredicted RBP17.33■□□□□ 0.37
ATG4B-201ENST00000344376 TGFB1I1O43294 461 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 TNNC2P02585 160 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 OR4Q2P0C623 313 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 TWF1Q12792 350 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
ATG4B-201ENST00000344376 MTSS1LQ765P7 747 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 XXYLT1Q8NBI6 393 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 ITFG1Q8TB96 612 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 ZNF512Q96ME7 567 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-201ENST00000344376 PGLYRP2Q96PD5 576 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 CORO1BQ9BR76 489 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 SMOC2Q9H3U7 446 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 ANK1P16157 1881 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 TECTAO75443 2155 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 ZNF197O14709 1029 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 CLIC2O15247 247 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 KLRC4O43908 158 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 BFSP1Q12934 665 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 MYO1EQ12965 1108 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 HTR4Q13639 388 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 DUOXA2Q1HG44 320 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 KMT5BQ4FZB7 885 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 CYP4A22Q5TCH4 519 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 PDZD4Q76G19 769 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-201ENST00000344376 WDR49Q8IV35 697 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 LEMD2Q8NC56 503 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 FNBP1Q96RU3 617 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 MFSD1Q9H3U5 465 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 GDPD2Q9HCC8 539 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 INTS13Q9NVM9 706 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 FBXL21Q9UKT6 434 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 YIPF1Q9Y548 306 aa17.32■□□□□ 0.36
ATG4B-201ENST00000344376 GOLGA6L4A6NEF3 574 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 ANHXE9PGG2 379 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 HUS1O60921 280 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 PRPF40AO75400 957 aaKnown RBP17.31■□□□□ 0.36
ATG4B-201ENST00000344376 KIF20AO95235 890 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 ALDH1A3P47895 512 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 WSCD1Q658N2 575 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 LMBRD2Q68DH5 695 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-201ENST00000344376 NPAS3Q8IXF0 933 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 C12orf56Q8IXR9 622 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 RSAD2Q8WXG1 361 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 ING5Q8WYH8 240 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 KCNH6Q9H252 994 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 ASAH2Q9NR71 780 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 GDE1Q9NZC3 331 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 NUMBLQ9Y6R0 609 aa17.31■□□□□ 0.36
ATG4B-201ENST00000344376 MTMR11A4FU01 709 aa17.3■□□□□ 0.36
ATG4B-201ENST00000344376 EXOC3O60645 756 aa17.3■□□□□ 0.36
ATG4B-201ENST00000344376 RPN1P04843 607 aaKnown RBP17.3■□□□□ 0.36
ATG4B-201ENST00000344376 DLATP10515 647 aaKnown RBP17.3■□□□□ 0.36
ATG4B-201ENST00000344376 EPHB3P54753 998 aa17.3■□□□□ 0.36
ATG4B-201ENST00000344376 SMARCB1Q12824 385 aa17.3■□□□□ 0.36
ATG4B-201ENST00000344376 STK4Q13043 487 aa17.3■□□□□ 0.36
ATG4B-201ENST00000344376 DUSP4Q13115 394 aa17.3■□□□□ 0.36
ATG4B-201ENST00000344376 SLC39A12Q504Y0 691 aa17.3■□□□□ 0.36
ATG4B-201ENST00000344376 CENPPQ6IPU0 288 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms