RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 RXFP1Q9HBX9 757 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 ETAA1Q9NY74 926 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 IGSF9BQ9UPX0 1349 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 SMAPO00193 183 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 MAFGO15525 162 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 SHMT1P34896 483 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 BCAR1P56945 870 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 HIC1Q14526 733 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 ANKRD20A4Q4UJ75 823 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 ANO5Q75V66 913 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 CNOT7Q9UIV1 285 aaKnown RBP11.45□□□□□ -0.58
RPL28-201ENST00000344063 HEY1Q9Y5J3 304 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 LOC100653049A0A140TA62 436 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 SRRM3A6NNA2 597 aaPredicted RBP11.45□□□□□ -0.58
RPL28-201ENST00000344063 KRT34O76011 436 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 KRT3P12035 628 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 SDC4P31431 198 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 XRRA1Q6P2D8 792 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 SESTD1Q86VW0 696 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 LRRC4Q9HBW1 653 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 SLC5A4Q9NY91 659 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 SPEF2Q9C093 1822 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 SGPL1O95470 568 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 ATP4AP20648 1035 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 ACOT2P49753 483 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 NCOA4Q13772 614 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 SNX30Q5VWJ9 437 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 PLA2G4FQ68DD2 849 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 GRAMD4Q6IC98 578 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 MCUQ8NE86 351 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 DNAJC19Q96DA6 116 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 MED15Q96RN5 788 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 SERPINI1Q99574 410 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 RANBP17Q9H2T7 1088 aaKnown RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 PFDN4Q9NQP4 134 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 AFF2P51816 1311 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 MAGEA13PA6NCF6 341 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 ZNF263O14978 683 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 NR3C2P08235 984 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 RPL21P46778 160 aaKnown RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 KPNA2P52292 529 aaKnown RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 SPDYCQ5MJ68 293 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 GALNT4Q8N4A0 578 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 SLC25A41Q8N5S1 370 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 EPS15L1Q9UBC2 864 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 TBX20Q9UMR3 447 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 BTNL10A8MVZ5 291 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 KRT16P08779 473 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 RALAP11233 206 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 KRT4P19013 534 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 FECHP22830 423 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 EIF3EP60228 445 aaKnown RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 CCNA1P78396 465 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 BAATQ14032 418 aaPredicted RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 ZCWPW2Q504Y3 356 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 ERMARDQ5T6L9 678 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 NSL1Q96IY1 281 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 RPAP3Q9H6T3 665 aaPredicted RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 DCLRE1BQ9H816 532 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 WTIPA6NIX2 430 aaPredicted RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 M0QYV0 167 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 ZC3H11AO75152 810 aaKnown RBP eCLIP11.44□□□□□ -0.58
RPL28-201ENST00000344063 PHKA2P46019 1235 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 CNGA3Q16281 694 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 FAM102AQ5T9C2 384 aaPredicted RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 C16orf87Q6PH81 154 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 FEZF2Q8TBJ5 459 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 DCPSQ96C86 337 aaKnown RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 CBWD1Q9BRT8 395 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 MMTAG2Q9BU76 263 aaKnown RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 APOL6Q9BWW8 343 aa11.44□□□□□ -0.58
RPL28-201ENST00000344063 MOV10L1Q9BXT6 1211 aaKnown RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 ZNF70Q9UC06 446 aaPredicted RBP11.44□□□□□ -0.58
RPL28-201ENST00000344063 PSTPIP1O43586 416 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 EXTL3O43909 919 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 SNX3O60493 162 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 HSPA4LO95757 839 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 CYP11B1P15538 503 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 GTF2H1P32780 548 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 SLC12A3P55017 1021 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 CDH6P55285 790 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 WWP1Q9H0M0 922 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 CIITAP33076 1130 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 ARMC3Q5W041 872 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 IZUMO2Q6UXV1 221 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 CDKL3Q8IVW4 592 aaPredicted RBP11.43□□□□□ -0.58
RPL28-201ENST00000344063 SPIRE2Q8WWL2 714 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 WRNIP1Q96S55 665 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 GCOM2Q9BZD3 368 aaPredicted RBP11.43□□□□□ -0.58
RPL28-201ENST00000344063 UBXN6Q9BZV1 441 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 MYLK2Q9H1R3 596 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 VPS11Q9H270 941 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 CAMTA1Q9Y6Y1 1673 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 RIPK2O43353 540 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 C15orf52Q6ZUT6 534 aaKnown RBP11.43□□□□□ -0.58
RPL28-201ENST00000344063 TMC2Q8TDI7 906 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 ACSF2Q96CM8 615 aaPredicted RBP11.43□□□□□ -0.58
RPL28-201ENST00000344063 DTNBP1Q96EV8 351 aa11.43□□□□□ -0.58
RPL28-201ENST00000344063 TRPV6Q9H1D0 765 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms