RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TRIM55Q9BYV6 548 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 OSBPL8Q9BZF1 889 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 ZWILCHQ9H900 591 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 KCNK13Q9HB14 408 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 IRAK4Q9NWZ3 460 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 HEY2Q9UBP5 337 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 POLIQ9UNA4 740 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 SHOC2Q9UQ13 582 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 POC1B-GALNT4F8VUJ3 575 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 NDC80O14777 642 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 ZBTB39O15060 712 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 CYP1A1P04798 512 aaPredicted RBP10.21□□□□□ -0.78
HOXA1-201ENST00000343060 DHRS4L1P0CG22 281 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 ADRA1DP25100 572 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 GPC3P51654 580 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 SNRPFP62306 86 aaKnown RBP10.21□□□□□ -0.78
HOXA1-201ENST00000343060 CERKLQ49MI3 558 aaPredicted RBP10.21□□□□□ -0.78
HOXA1-201ENST00000343060 ARHGAP24Q8N264 748 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 XXYLT1Q8NBI6 393 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 SEMA4DQ92854 862 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 MCUR1Q96AQ8 359 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 ALKBH8Q96BT7 664 aaKnown RBP10.21□□□□□ -0.78
HOXA1-201ENST00000343060 CCDC17Q96LX7 622 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 VCX3BQ9H321 246 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 VCX3AQ9NNX9 186 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 METTL5Q9NRN9 209 aaKnown RBP10.21□□□□□ -0.78
HOXA1-201ENST00000343060 STK32BQ9NY57 414 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 WRAP73Q9P2S5 460 aaPredicted RBP10.21□□□□□ -0.78
HOXA1-201ENST00000343060 PHF24Q9UPV7 400 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 BCS1LQ9Y276 419 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 WASF2Q9Y6W5 498 aa10.21□□□□□ -0.78
HOXA1-201ENST00000343060 RGPD3A6NKT7 1758 aaPredicted RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 RGPD4Q7Z3J3 1758 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 C6orf229H3BNL8 230 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 K7ENM7 598 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 LIASO43766 372 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 BMP3P12645 472 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 ATP2B4P23634 1241 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 CRABP2P29373 138 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 CDK7P50613 346 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 SH3BGRP55822 239 aaPredicted RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 GPSM2P81274 684 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 HNRNPDQ14103 355 aaKnown RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 DDB1Q16531 1140 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 B3GNT9Q6UX72 402 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 FBXO11Q86XK2 927 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 RHOT1Q8IXI2 618 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 VPS52Q8N1B4 723 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 PPM1KQ8N3J5 372 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 BANPQ8N9N5 519 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 EXD1Q8NHP7 514 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 CBWD1Q9BRT8 395 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 PPP1R12CQ9BZL4 782 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 UBE2OQ9C0C9 1292 aaKnown RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 HSPBP1Q9NZL4 362 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 NYAP2Q9P242 653 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 LTBP1Q14766 1721 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 CFAP69A5D8W1 941 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 PYGLP06737 847 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 DLDP09622 509 aaKnown RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 KRT4P19013 534 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 NEK3P51956 506 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 ARFIP2P53365 341 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 GEMIN4P57678 1058 aaKnown RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 LSAMPQ13449 338 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 PICALMQ13492 652 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 LIN52Q52LA3 116 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 LRRC23Q53EV4 343 aaPredicted RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 EAPPQ56P03 285 aaPredicted RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 RNASEH2BQ5TBB1 312 aaKnown RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 SLFN13Q68D06 897 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 ADGRD1Q6QNK2 874 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 NET1Q7Z628 596 aaPredicted RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 MYLK4Q86YV6 388 aaPredicted RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 CCDC24Q8N4L8 307 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 ALLCQ8N6M5 410 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 STKLD1Q8NE28 680 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 PRR11Q96HE9 360 aaPredicted RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 ACCSQ96QU6 501 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 NDNQ99608 321 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 ST6GALNAC4Q9H4F1 302 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 PCIF1Q9H4Z3 704 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 GPAMQ9HCL2 828 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 ZDHHC7Q9NXF8 308 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 SRP68Q9UHB9 627 aaKnown RBP10.2□□□□□ -0.78
HOXA1-201ENST00000343060 DCTN4Q9UJW0 460 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 TMCO1Q9UM00 188 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 COMMD3-BMI1R4GMX3 469 aa10.2□□□□□ -0.78
HOXA1-201ENST00000343060 MYPNQ86TC9 1320 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 TISP43B9A030 160 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 ADRB2P07550 413 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 SERPINB3P29508 390 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 GPX6P59796 221 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 DSG1Q02413 1049 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 THOC5Q13769 683 aaKnown RBP10.19□□□□□ -0.78
HOXA1-201ENST00000343060 TRMT5Q32P41 509 aaKnown RBP10.19□□□□□ -0.78
HOXA1-201ENST00000343060 CCDC62Q6P9F0 684 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 ADGRG6Q86SQ4 1221 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 GLIS1Q8NBF1 620 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 DTX3LQ8TDB6 740 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms