RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 MTA2O94776 668 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 IFI16Q16666 785 aaKnown RBP18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 NAA35Q5VZE5 725 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 C9orf57Q5W0N0 161 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 RSRC2Q7L4I2 434 aaKnown RBP18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 PASD1Q8IV76 773 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 MCOLN2Q8IZK6 566 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 SLC4A11Q8NBS3 891 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 OSBPL9Q96SU4 736 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 CYP3A43Q9HB55 503 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 CHST12Q9NRB3 414 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 FAM105AQ9NUU6 356 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 PUF60Q9UHX1 559 aaKnown RBP18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 UBQLN1Q9UMX0 589 aaKnown RBP18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 PTPN22Q9Y2R2 807 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 TET1Q8NFU7 2136 aa18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 SCN5AQ14524 2016 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 PIRO00625 290 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 ORC1Q13415 861 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 MON1BQ7L1V2 547 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 CREG2Q8IUH2 290 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 GSTCDQ8NEC7 633 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 MNS1Q8NEH6 495 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 BEST2Q8NFU1 509 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 GTF3C4Q9UKN8 822 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 HYOU1Q9Y4L1 999 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 NME7Q9Y5B8 376 aa18.3■□□□□ 0.52
FRMD4A-202ENST00000342409 YWHAEP62258 255 aaKnown RBP18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 INCA1Q0VD86 236 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 PTP4A2Q12974 167 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 MBTPS1Q14703 1052 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 MTFR1Q15390 333 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 PTPROQ16827 1216 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 ERCC6LQ2NKX8 1250 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 LLGL2Q6P1M3 1020 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 TRIM72Q6ZMU5 477 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 NT5DC3Q86UY8 548 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 RHOT2Q8IXI1 618 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 ZNF653Q96CK0 615 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 CAPZA3Q96KX2 299 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 ZFP42Q96MM3 310 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 PPP1R10Q96QC0 940 aaKnown RBP18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 TSPAN18Q96SJ8 248 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 MMS19Q96T76 1030 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 PSMB7Q99436 277 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 GOLGA2P5Q9HBQ8 144 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 PAK6Q9NQU5 681 aaPredicted RBP18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 GPR182O15218 404 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 CKBP12277 381 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 CXCR5P32302 372 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 AFF1P51825 1210 aaKnown RBP18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 C2CD6Q53TS8 623 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 MRPL10Q7Z7H8 261 aaKnown RBP18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 WDTC1Q8N5D0 677 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 LRRC52Q8N7C0 313 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 LPPQ93052 612 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 STARD7Q9NQZ5 370 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 PCDHGC3Q9UN70 934 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 NOD1Q9Y239 953 aa18.29■□□□□ 0.52
FRMD4A-202ENST00000342409 A0A0U1RQG5 324 aaPredicted RBP18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 EFCAB8A8MWE9 144 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 ARVCFO00192 962 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 SPTLC1O15269 473 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 KIF4AO95239 1232 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 CDK7P50613 346 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 ELF2Q15723 593 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 AGMOQ6ZNB7 445 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 PHF13Q86YI8 300 aaPredicted RBP18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 CEP112Q8N8E3 955 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 MIOSQ9NXC5 875 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 EHD2Q9NZN4 543 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 CTTNBP2NLQ9P2B4 639 aa18.28■□□□□ 0.52
FRMD4A-202ENST00000342409 TANC1Q9C0D5 1861 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 TSC2P49815 1807 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 PAEPP09466 180 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 TCP1P17987 556 aaKnown RBP18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 CYP3A5P20815 502 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 IGFBP6P24592 240 aaPredicted RBP18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 CDH5P33151 784 aaPredicted RBP18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 PAK2Q13177 524 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 DENND1BQ6P3S1 775 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 DAAM2Q86T65 1068 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 CPNE8Q86YQ8 564 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 MRPL45Q9BRJ2 306 aaKnown RBP18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 NUP85Q9BW27 656 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 TRAIPQ9BWF2 469 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 AVENQ9NQS1 362 aaPredicted RBP18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 WBP1LQ9NX94 342 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 SMARCAL1Q9NZC9 954 aa18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 CNOT8Q9UFF9 292 aaKnown RBP18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 BARX2Q9UMQ3 279 aaPredicted RBP18.27■□□□□ 0.52
FRMD4A-202ENST00000342409 TLR3O15455 904 aaKnown RBP18.26■□□□□ 0.51
FRMD4A-202ENST00000342409 ZNF623O75123 536 aa18.26■□□□□ 0.51
FRMD4A-202ENST00000342409 CAND2O75155 1236 aa18.26■□□□□ 0.51
FRMD4A-202ENST00000342409 ITGA4P13612 1032 aa18.26■□□□□ 0.51
FRMD4A-202ENST00000342409 P4HA1P13674 534 aa18.26■□□□□ 0.51
FRMD4A-202ENST00000342409 RRM1P23921 792 aa18.26■□□□□ 0.51
FRMD4A-202ENST00000342409 TNNC1P63316 161 aa18.26■□□□□ 0.51
FRMD4A-202ENST00000342409 MYO1EQ12965 1108 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms