RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 TAF6LQ9Y6J9 622 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 EEF2KO00418 725 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 PLSCR1O15162 318 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 PHF2O75151 1096 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 HAUS5O94927 633 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 NPTXRO95502 500 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 VDRP11473 427 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 GPD1P21695 349 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 LHX1P48742 406 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 SLC12A1Q13621 1099 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 PCNX4Q63HM2 1172 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 ANKRD40Q6AI12 368 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 TIGD7Q6NT04 549 aaPredicted RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 NUDCD3Q8IVD9 361 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 C4orf19Q8IY42 314 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 SLC26A7Q8TE54 656 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 RAPGEF5Q92565 580 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 TTC17Q96AE7 1141 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 ROPN1BQ9BZX4 212 aaPredicted RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 ROPN1Q9HAT0 212 aaPredicted RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 GTSE1Q9NYZ3 720 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 SIGLEC1Q9BZZ2 1709 aa8.09□□□□□ -1.12
ATP2B4-201ENST00000341360 MAP2K7O14733 419 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 SUPT3HO75486 399 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 LSM8O95777 96 aaKnown RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 GYS2P54840 703 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 TROAPQ12815 778 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 PTPAQ15257 358 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 SYTL3Q4VX76 610 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 FIGNQ5HY92 759 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 CYP4A22Q5TCH4 519 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 TAS2R42Q7RTR8 314 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 RIN2Q8WYP3 895 aaPredicted RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 APBB2Q92870 758 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 FAM53CQ9NYF3 392 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 TBK1Q9UHD2 729 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 SCOCQ9UIL1 159 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 DBR1Q9UK59 544 aaKnown RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 ARHGAP26Q9UNA1 814 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 CFAP73A6NFT4 308 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 NDUFS3O75489 264 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 BRAFP15056 766 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 ANXA11P50995 505 aaKnown RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 PPP2R2AP63151 447 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 GFPT1Q06210 699 aaPredicted RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 Q4G0T1 1027 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 METTL7BQ6UX53 244 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 ITIH5Q86UX2 942 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 REM2Q8IYK8 340 aaPredicted RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 NCLNQ969V3 563 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 OPTNQ96CV9 577 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 HPDLQ96IR7 371 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 AIPL1Q9NZN9 384 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 NWD1Q149M9 1564 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 GNL1P36915 607 aaPredicted RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 PDK2Q15119 407 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 THEMIS2Q5TEJ8 643 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 NT5DC1Q5TFE4 455 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 RASIP1Q5U651 963 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 INTS5Q6P9B9 1019 aaKnown RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 MPZL3Q6UWV2 235 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 C15orf52Q6ZUT6 534 aaKnown RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 USP50Q70EL3 339 aaPredicted RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 TXNRD3Q86VQ6 643 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 CDC26Q8NHZ8 85 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 OSCP1Q8WVF1 389 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 TEKT4Q8WW24 435 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 HEMGNQ9BXL5 484 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 SLC7A5P2Q9GIP4 190 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 KRT82Q9NSB4 513 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 SNX12Q9UMY4 172 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 GTPBP10A4D1E9 387 aaKnown RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 PI4K2BG5E9Z4 385 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 NCAM2O15394 837 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 CYP26A1O43174 497 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 URODP06132 367 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 PSMA3P25788 255 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 HOXA10P31260 410 aaPredicted RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 ZNF280DQ6N043 979 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 RRM2BQ7LG56 351 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 TMEM143Q96AN5 459 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 CARD9Q9H257 536 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 EPC1Q9H2F5 836 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 TBX20Q9UMR3 447 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 FAF1Q9UNN5 650 aaPredicted RBP8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 AKAP12Q02952 1782 aa8.08□□□□□ -1.12
ATP2B4-201ENST00000341360 UBA6A0AVT1 1052 aaPredicted RBP8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 E2F6O75461 281 aa8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 LCP1P13796 627 aa8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 HMOX2P30519 316 aa8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 TCF7P36402 384 aaPredicted RBP8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 SLCO1A2P46721 670 aa8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 ARL4DP49703 201 aa8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 ARSEP51690 589 aa8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 ARFIP2P53365 341 aa8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 GEMP55040 296 aa8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 FKBP1BP68106 108 aa8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 MCL1Q07820 350 aa8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 NSUN2Q08J23 767 aaKnown RBP eCLIP8.07□□□□□ -1.12
ATP2B4-201ENST00000341360 OOSP2Q86WS3 158 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms