RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 SETD4Q9NVD3 440 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 SMG5Q9UPR3 1016 aaKnown RBP13.5□□□□□ -0.25
DNMT1-201ENST00000340748 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.5□□□□□ -0.25
DNMT1-201ENST00000340748 EXTL3O43909 919 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 APOEP02649 317 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 WDR72Q3MJ13 1102 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 GMCL1Q96IK5 515 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 MS4A14Q96JA4 679 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 COL3A1P02461 1466 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-201ENST00000340748 IGSF9BQ9UPX0 1349 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 DNAJC8O75937 253 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-201ENST00000340748 NOP14P78316 857 aaKnown RBP13.5□□□□□ -0.25
DNMT1-201ENST00000340748 LY6KQ17RY6 165 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 KAZALD1Q96I82 304 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 SLC4A7Q9Y6M7 1214 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 H3BRB1 525 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 OAZ1P54368 228 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 TEDDM1Q5T9Z0 273 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 CXCL17Q6UXB2 119 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 DCP1BQ8IZD4 617 aaKnown RBP13.5□□□□□ -0.25
DNMT1-201ENST00000340748 CERS5Q8N5B7 392 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 ZNF512Q96ME7 567 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-201ENST00000340748 TUT1Q9H6E5 874 aaKnown RBP13.5□□□□□ -0.25
DNMT1-201ENST00000340748 SP110Q9HB58 689 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 EHD2Q9NZN4 543 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 FAM198AQ9UFP1 575 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 MYO5BQ9ULV0 1848 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 SMAPO00193 183 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 CCDC22O60826 627 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 PSEN2P49810 448 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 PHEXP78562 749 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 TMEM132DQ14C87 1099 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 AGBL2Q5U5Z8 902 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 CATSPER3Q86XQ3 398 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 MMGT1Q8N4V1 131 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 THOC1Q96FV9 657 aaKnown RBP13.5□□□□□ -0.25
DNMT1-201ENST00000340748 FGD4Q96M96 766 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 C17orf75Q9HAS0 396 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 NDE1Q9NXR1 346 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 PCDHB2Q9Y5E7 798 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.5□□□□□ -0.25
DNMT1-201ENST00000340748 SPDYE5A6NIY4 337 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 CHUKO15111 745 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 PSMD3O43242 534 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 SLC9A1P19634 815 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 FGFR4P22455 802 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 SHMT1P34896 483 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 ACOT2P49753 483 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 KRT33BQ14525 404 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 RBM43Q6ZSC3 357 aaKnown RBP13.49□□□□□ -0.25
DNMT1-201ENST00000340748 ANKRD7Q92527 254 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 CCDC138Q96M89 665 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 CYTH2Q99418 400 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 MRIQ9BWK5 157 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 GTSE1Q9NYZ3 720 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 AGAP1Q9UPQ3 857 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 FRMD3A2A2Y4 597 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 MDH1P40925 334 aaKnown RBP13.49□□□□□ -0.25
DNMT1-201ENST00000340748 PLA2G4FQ68DD2 849 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 ST13P4Q8IZP2 240 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-201ENST00000340748 APPL2Q8NEU8 664 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 CPA5Q8WXQ8 436 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 EPAS1Q99814 870 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 STOML1Q9UBI4 398 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 HPSEQ9Y251 543 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 H7C4K7 107 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 NFIBO00712 420 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 LCP1P13796 627 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 ST8SIA6P61647 398 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 CACNB2Q08289 660 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-201ENST00000340748 KIZQ2M2Z5 673 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 FAM129AQ9BZQ8 928 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 SH3BP1Q9Y3L3 701 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 CFAP69A5D8W1 941 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 GPR25O00155 361 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 KLRC2P26717 231 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 PDE1CQ14123 709 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-201ENST00000340748 ZC2HC1CQ53FD0 456 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-201ENST00000340748 C15orf52Q6ZUT6 534 aaKnown RBP13.49□□□□□ -0.25
DNMT1-201ENST00000340748 SLC30A5Q8TAD4 765 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 ECT2Q9H8V3 914 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 PXMP2Q9NR77 195 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 FMN2Q9NZ56 1722 aa13.49□□□□□ -0.25
DNMT1-201ENST00000340748 PI4K2BG5E9Z4 385 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 TLL1O43897 1013 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 GHRP10912 638 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 MED15Q96RN5 788 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 EMILIN2Q9BXX0 1053 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 EPN3Q9H201 632 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 ZCCHC17Q9NP64 241 aaKnown RBP13.48□□□□□ -0.25
DNMT1-201ENST00000340748 YDJCA8MPS7 323 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 HNRNPCL1O60812 293 aaKnown RBP13.48□□□□□ -0.25
DNMT1-201ENST00000340748 SULT1E1P49888 294 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 ALDH5A1P51649 535 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-201ENST00000340748 CENPCQ03188 943 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 SNX17Q15036 470 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 GRAMD1BQ3KR37 738 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 MTHFD1LQ6UB35 978 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms