RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CBWD1Q9BRT8 395 aa14.41□□□□□ -0.1
SIRPB3P-201ENST00000340424 IKZF4Q9H2S9 585 aa14.41□□□□□ -0.1
SIRPB3P-201ENST00000340424 CYP4F11Q9HBI6 524 aa14.41□□□□□ -0.1
SIRPB3P-201ENST00000340424 HSFX1Q9UBD0 423 aa14.41□□□□□ -0.1
SIRPB3P-201ENST00000340424 ITGA11Q9UKX5 1188 aa14.41□□□□□ -0.1
SIRPB3P-201ENST00000340424 CDH7Q9ULB5 785 aa14.41□□□□□ -0.1
SIRPB3P-201ENST00000340424 POLIQ9UNA4 740 aa14.41□□□□□ -0.1
SIRPB3P-201ENST00000340424 DUSP12Q9UNI6 340 aa14.41□□□□□ -0.1
SIRPB3P-201ENST00000340424 HPSEQ9Y251 543 aa14.41□□□□□ -0.1
SIRPB3P-201ENST00000340424 A0A1W2PQ27 194 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 A0A1W2PQ64 194 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 A0A1W2PQD8 194 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 ZNF233A6NK53 670 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 ACTN4O43707 911 aaKnown RBP14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 ASGR2P07307 311 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 PFKFB1P16118 471 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 ARPP19P56211 112 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 ADCY1Q08828 1119 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 SMARCB1Q12824 385 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 PSMD2Q13200 908 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 GPR17Q13304 367 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 PLD1Q13393 1074 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 MTSS1LQ765P7 747 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 METTL23Q86XA0 190 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 FBXL6Q8N531 539 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 LRRC52Q8N7C0 313 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 LEMD2Q8NC56 503 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 GOLGA5Q8TBA6 731 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 MYADMQ96S97 322 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 PRRX2Q99811 253 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 INSL5Q9Y5Q6 135 aa14.4□□□□□ -0.1
SIRPB3P-201ENST00000340424 ANHXE9PGG2 379 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 PPEF2O14830 753 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 PRPF40AO75400 957 aaKnown RBP14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 MICAL2O94851 1124 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 PTPN2P17706 415 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 HOXD13P35453 343 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 SYKP43405 635 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 AFMP43652 599 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 NUCB2P80303 420 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 TFAMQ00059 246 aaKnown RBP14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 CUL4BQ13620 913 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 C12orf56Q8IXR9 622 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 THEM5Q8N1Q8 247 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 SPATA18Q8TC71 538 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 SCFD1Q8WVM8 642 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 SLC39A7Q92504 469 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 HPS3Q969F9 1004 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 PAGE5Q96GU1 130 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 CCDC34Q96HJ3 373 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 BLZF1Q9H2G9 400 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 PCIF1Q9H4Z3 704 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 AGPAT3Q9NRZ7 376 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 GDE1Q9NZC3 331 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 HSPBP1Q9NZL4 362 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 DNMT3BQ9UBC3 853 aaKnown RBP14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 SERTAD1Q9UHV2 236 aa14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 R3HCC1Q9Y3T6 440 aaKnown RBP14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 TIMM13Q9Y5L4 95 aaPredicted RBP14.39□□□□□ -0.11
SIRPB3P-201ENST00000340424 TSC2P49815 1807 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 DOCK8Q8NF50 2099 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 A0A1B0GVL5 298 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 KPNA7A9QM74 516 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 CYB561D2O14569 222 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 ZNF197O14709 1029 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 SPTLC1O15269 473 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 TGFB1I1O43294 461 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 RHOP08100 348 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 TMEM191BP0C7N4 346 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 RBP5P82980 135 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 KNOP1Q1ED39 458 aaKnown RBP14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 IQCEQ6IPM2 695 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 C1orf127Q8N9H9 656 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 GLIS3Q8NEA6 775 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 C2orf15Q8WU43 125 aaKnown RBP14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 TMEM174Q8WUU8 243 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 FGF13Q92913 245 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 CCDC47Q96A33 483 aaKnown RBP14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 ANKRD36BP1Q96IX9 119 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 OCEL1Q9H607 264 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 EXOC1Q9NV70 894 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 MRPS23Q9Y3D9 190 aaKnown RBP14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 MYO10Q9HD67 2058 aa14.38□□□□□ -0.11
SIRPB3P-201ENST00000340424 GOLGA8IPA6NC78 632 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 GOLGA8JA6NMD2 632 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 KIF20AO95235 890 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 SEC24AO95486 1093 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 TNNC2P02585 160 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 ITGB3P05106 788 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 SRFP11831 508 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 POLR2BP30876 1174 aaKnown RBP14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 HTR4Q13639 388 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 SNRNP35Q16560 246 aaKnown RBP14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 DUOXA2Q1HG44 320 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 RNF19BQ6ZMZ0 732 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 WDR49Q8IV35 697 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 TMEM86AQ8N2M4 240 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 TMEM130Q8N3G9 435 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 XXYLT1Q8NBI6 393 aa14.37□□□□□ -0.11
SIRPB3P-201ENST00000340424 ZSWIM2Q8NEG5 633 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms