RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 IVNS1ABPQ9Y6Y0 642 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 WDR46O15213 610 aaKnown RBP11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 PEX10O60683 326 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 CBX6O95503 412 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 CALB1P05937 261 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 APRTP07741 180 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 PECAM1P16284 738 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 ARFIP2P53365 341 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 IFRD2Q12894 506 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 PGM5Q15124 567 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 ENOSF1Q7L5Y1 443 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 DAW1Q8N136 415 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 MPHOSPH6Q99547 160 aaKnown RBP11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 TTC1Q99614 292 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 FHDC1Q9C0D6 1143 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 C12orf65Q9H3J6 166 aaKnown RBP11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 RPF1Q9H9Y2 349 aaKnown RBP11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 CYP26B1Q9NR63 512 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 NCANO14594 1321 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 MYH3P11055 1940 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 O00370 1275 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 SMIM24O75264 130 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 DCTN3O75935 186 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 HAUS5O94927 633 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 MKRN3Q13064 507 aaKnown RBP11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 PSMD6Q15008 389 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 LRRC36Q1X8D7 754 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 Q3C1V9 767 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 FAM71AQ8IYT1 594 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 OSBPL1AQ9BXW6 950 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 SHCBP1LQ9BZQ2 653 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 KDM4CQ9H3R0 1056 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 SLIT2O94813 1529 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 SNX3O60493 162 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 PROSCO94903 275 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 RBP3P10745 1247 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 CTCFP49711 727 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 TAS2R40P59535 323 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 MYL6P60660 151 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 FAM160B1Q5W0V3 765 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 RAB6BQ9NRW1 208 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 HESX1Q9UBX0 185 aa11.68□□□□□ -0.54
SEMA4D-201ENST00000339861 LDHAP00338 332 aaKnown RBP11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 DUOXA2Q1HG44 320 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 ACCSLQ4AC99 568 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 XKR3Q5GH77 459 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 TATDN1Q6P1N9 297 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 RTKN2Q8IZC4 609 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 ATP11CQ8NB49 1132 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 CCDC124Q96CT7 223 aaKnown RBP11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 FAM161BQ96MY7 647 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 TSNARE1Q96NA8 513 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 KIAA1586Q9HCI6 787 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 WHRNQ9P202 907 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 XPO7Q9UIA9 1087 aaKnown RBP11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 CCDC78A2IDD5 438 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 EXTL3O43909 919 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 TBXAS1P24557 533 aaPredicted RBP11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 STAT5BP51692 787 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 EPHB1P54762 984 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 YWHAEP62258 255 aaKnown RBP11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 SPRED3Q2MJR0 410 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 CCHCR1Q8TD31 782 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 AGAP11Q8TF27 550 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 RNF34Q969K3 372 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 RNF19AQ9NV58 838 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 KCNG1Q9UIX4 513 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 GPC3P51654 580 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 RNASELQ05823 741 aaKnown RBP11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 SLFN11Q7Z7L1 901 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 RCOR2Q8IZ40 523 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 SPATA18Q8TC71 538 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 ACTL9Q8TC94 416 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 SHC3Q92529 594 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 FAM111AQ96PZ2 611 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 MTFR1LQ9H019 292 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 FAM49AQ9H0Q0 323 aaPredicted RBP11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 CYP4F11Q9HBI6 524 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 GPATCH2LQ9NWQ4 482 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 CHD4Q14839 1912 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 RPTORQ8N122 1335 aa11.67□□□□□ -0.54
SEMA4D-201ENST00000339861 NCF2P19878 526 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 SERPINB6P35237 376 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 CDH8P55286 799 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 POLE2P56282 527 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 OTUD4Q01804 1114 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 TFDP1Q14186 410 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 ZDHHC24Q6UX98 284 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 TRIM50Q86XT4 487 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 TMEM161BQ8NDZ6 487 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 PSPC1Q8WXF1 523 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 PPP1R36Q96LQ0 422 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 ACAD9Q9H845 621 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 PXMP2Q9NR77 195 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 METTL5Q9NRN9 209 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 GRHL1Q9NZI5 618 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 TMEM59LQ9UK28 342 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 STXBP5LQ9Y2K9 1186 aa11.66□□□□□ -0.54
SEMA4D-201ENST00000339861 USH1CQ9Y6N9 552 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms