RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ZNF236Q9UL36 1845 aa17.34■□□□□ 0.37
LITAF-201ENST00000339430 NOP56O00567 594 aaKnown RBP17.34■□□□□ 0.37
LITAF-201ENST00000339430 CHN1P15882 459 aa17.34■□□□□ 0.37
LITAF-201ENST00000339430 CYP2B6P20813 491 aa17.34■□□□□ 0.37
LITAF-201ENST00000339430 ACO1P21399 889 aaKnown RBP17.34■□□□□ 0.37
LITAF-201ENST00000339430 GNA15P30679 374 aa17.34■□□□□ 0.37
LITAF-201ENST00000339430 CLDN10P78369 228 aa17.34■□□□□ 0.37
LITAF-201ENST00000339430 CUL2Q13617 745 aa17.34■□□□□ 0.37
LITAF-201ENST00000339430 BYSLQ13895 437 aaKnown RBP17.34■□□□□ 0.37
LITAF-201ENST00000339430 OR5B17Q8NGF7 314 aa17.34■□□□□ 0.37
LITAF-201ENST00000339430 SEPT1Q8WYJ6 367 aa17.34■□□□□ 0.37
LITAF-201ENST00000339430 SPATA33Q96N06 139 aa17.34■□□□□ 0.37
LITAF-201ENST00000339430 DDX20Q9UHI6 824 aaKnown RBP17.34■□□□□ 0.37
LITAF-201ENST00000339430 R3HDM2Q9Y2K5 976 aaKnown RBP17.34■□□□□ 0.37
LITAF-201ENST00000339430 MAFBQ9Y5Q3 323 aaPredicted RBP17.34■□□□□ 0.37
LITAF-201ENST00000339430 IGKV6D-21A0A0A0MT36 114 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 CYP1A1P04798 512 aaPredicted RBP17.33■□□□□ 0.37
LITAF-201ENST00000339430 ADCYAP1R1P41586 468 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 SSR1P43307 286 aaKnown RBP17.33■□□□□ 0.37
LITAF-201ENST00000339430 CENPCQ03188 943 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 SF3A3Q12874 501 aaKnown RBP eCLIP17.33■□□□□ 0.37
LITAF-201ENST00000339430 MON1BQ7L1V2 547 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 SPATS2Q86XZ4 545 aaKnown RBP17.33■□□□□ 0.37
LITAF-201ENST00000339430 KAT2BQ92831 832 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 CCDC114Q96M63 670 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 RUNDC3BQ96NL0 473 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 PCYT2Q99447 389 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 GPR20Q99678 358 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 CCDC113Q9H0I3 377 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 AVENQ9NQS1 362 aaPredicted RBP17.33■□□□□ 0.37
LITAF-201ENST00000339430 FLRT1Q9NZU1 646 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 NUB1Q9Y5A7 615 aa17.33■□□□□ 0.37
LITAF-201ENST00000339430 SRRM3A6NNA2 597 aaPredicted RBP17.33■□□□□ 0.36
LITAF-201ENST00000339430 ACSL3O95573 720 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 RARGP13631 454 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 CHKAP35790 457 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 SLMAPQ14BN4 828 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 CCDC38Q502W7 563 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 ZNF677Q86XU0 584 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 SLC7A3Q8WY07 619 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 USP6NLQ92738 828 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 PGM2Q96G03 612 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 DDX27Q96GQ7 796 aaKnown RBP17.33■□□□□ 0.36
LITAF-201ENST00000339430 ARHGAP39Q9C0H5 1083 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 ABHD16BQ9H3Z7 469 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 DHX33Q9H6R0 707 aaKnown RBP17.33■□□□□ 0.36
LITAF-201ENST00000339430 ADAM22Q9P0K1 906 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 GJD2Q9UKL4 321 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 STYXL1Q9Y6J8 313 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 CAPN7Q9Y6W3 813 aa17.33■□□□□ 0.36
LITAF-201ENST00000339430 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.32■□□□□ 0.36
LITAF-201ENST00000339430 TTLL13PA6NNM8 815 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 TP73O15350 636 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 THAP12O43422 761 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 PAEPP09466 180 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 NAMPTP43490 491 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 TAS2R40P59535 323 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 BPIFB4P59827 614 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 HTRA3P83110 453 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 DRP2Q13474 957 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 ACVR2BQ13705 512 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 CCL14Q16627 93 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 FBXW10Q5XX13 1052 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 MMS22LQ6ZRQ5 1243 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 FAM81BQ96LP2 452 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 CDC42EP4Q9H3Q1 356 aaKnown RBP17.32■□□□□ 0.36
LITAF-201ENST00000339430 CNOT10Q9H9A5 744 aaKnown RBP17.32■□□□□ 0.36
LITAF-201ENST00000339430 RBM47A0AV96 593 aaKnown RBP17.32■□□□□ 0.36
LITAF-201ENST00000339430 HOXC6P09630 235 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 MYBL1P10243 752 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 RALAP11233 206 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 ARL2P36404 184 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 STAT5BP51692 787 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 ADCY2Q08462 1091 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 PRAMEF19Q5SWL8 479 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 CPLX4Q7Z7G2 160 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 RBBP8NLQ8NC74 664 aaPredicted RBP17.32■□□□□ 0.36
LITAF-201ENST00000339430 PWWP2AQ96N64 755 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 XPO6Q96QU8 1125 aaKnown RBP17.32■□□□□ 0.36
LITAF-201ENST00000339430 ADAM7Q9H2U9 754 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 AAASQ9NRG9 546 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 KLHL11Q9NVR0 708 aa17.32■□□□□ 0.36
LITAF-201ENST00000339430 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.32■□□□□ 0.36
LITAF-201ENST00000339430 PROSCO94903 275 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 CPP00450 1065 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 CD58P19256 250 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 RGS2P41220 211 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 CDR1P51861 262 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 NOMO3P69849 1222 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 NOP14P78316 857 aaKnown RBP17.31■□□□□ 0.36
LITAF-201ENST00000339430 ARHGAP1Q07960 439 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 LONRF1Q17RB8 773 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 C6orf118Q5T5N4 469 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 ZBTB33Q86T24 672 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 TRIM11Q96F44 468 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 DCLK3Q9C098 648 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 SIP14410 1827 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 ATXN2Q99700 1313 aaKnown RBP17.31■□□□□ 0.36
LITAF-201ENST00000339430 RASGRF2O14827 1237 aa17.31■□□□□ 0.36
LITAF-201ENST00000339430 CLTAP09496 248 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms