RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TRIM51Q9BSJ1 452 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 UBXN6Q9BZV1 441 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 TRIM31Q9BZY9 425 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 NEUROG2Q9H2A3 272 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 AGAP1Q9UPQ3 857 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 SCN1AP35498 2009 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 MEIS3P2A8K0S8 358 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 AOC2O75106 756 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 ERLIN1O75477 346 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 IGHA2P01877 340 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 MCF2P10911 925 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 FLT3P36888 993 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 PSMC4P43686 418 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 KCNJ1P48048 391 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 FAM193AP78312 1265 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 FSCN1Q16658 493 aaKnown RBP7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 DENND1BQ6P3S1 775 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 AENQ8WTP8 325 aaKnown RBP7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 TRIB2Q92519 343 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 C18orf8Q96DM3 657 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 ACAP3Q96P50 834 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 FAM118BQ9BPY3 351 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 KLHL11Q9NVR0 708 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 NRCAMQ92823 1304 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 MBLAC1A4D2B0 266 aaPredicted RBP7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 DCAF8L1A6NGE4 600 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 MTA2O94776 668 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 CD19P15391 556 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 OAS2P29728 719 aaKnown RBP7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 GJC1P36383 396 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 FLT3LGP49771 235 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 PSEN2P49810 448 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 AFF1P51825 1210 aaKnown RBP7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 RAD23BP54727 409 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 TAS2R40P59535 323 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 BPIFB4P59827 614 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 POU5F1Q01860 360 aaKnown RBP7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 OGDHQ02218 1023 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 FAM182AQ5T1J6 154 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 C11orf63Q6NUN7 778 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 ACSF2Q96CM8 615 aaPredicted RBP7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 KIF12Q96FN5 646 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 ELOVL4Q9GZR5 314 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 ZMYND15Q9H091 742 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 GOLGA2P5Q9HBQ8 144 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 ZFYVE28Q9HCC9 887 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 GDF3Q9NR23 364 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 TUBGCP4Q9UGJ1 667 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 USTQ9Y2C2 406 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 NME7Q9Y5B8 376 aa7.88□□□□□ -1.15
SRFBP1-201ENST00000339397 COL1A2P08123 1366 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 AGPSO00116 658 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 HAS3O00219 553 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 CES2O00748 559 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 DAPK3O43293 454 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 EIF4BP23588 611 aaKnown RBP7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 ECHS1P30084 290 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 RGS2P41220 211 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 PURAQ00577 322 aaKnown RBP7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 TMEM132DQ14C87 1099 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 TCEAL1Q15170 157 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 ZNF667Q5HYK9 610 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 GNASQ5JWF2 1037 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 TXNRD3NBQ6F5E7 133 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 TTC27Q6P3X3 843 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 PRELID2Q8N945 189 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 SLC4A11Q8NBS3 891 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 HPDLQ96IR7 371 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 HEMGNQ9BXL5 484 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 CARD9Q9H257 536 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 DPH5Q9H2P9 285 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 DPP3Q9NY33 737 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 HPCAL4Q9UM19 191 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 TLL2Q9Y6L7 1015 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 F8VP50 259 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 MYO1FO00160 1098 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 DARSP14868 501 aaKnown RBP7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 ELNP15502 786 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 MMP8P22894 467 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 AP3M2P53677 418 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 LACTBP83111 547 aaPredicted RBP7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 PRKCZQ05513 592 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 ADCY2Q08462 1091 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 ZNF252P-AS1Q0IIN9 211 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 SNX17Q15036 470 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 ZNF677Q86XU0 584 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 MSL3Q8N5Y2 521 aaKnown RBP7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 ARRDC4Q8NCT1 418 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 UBA3Q8TBC4 463 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 RPS6KC1Q96S38 1066 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 APBA2Q99767 749 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 UVRAGQ9P2Y5 699 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 PIN4Q9Y237 131 aaKnown RBP7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 PCDHA3Q9Y5H8 950 aa7.87□□□□□ -1.15
SRFBP1-201ENST00000339397 RRN3P2A6NIE6 340 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 TLR3O15455 904 aaKnown RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 IL18RAPO95256 599 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 SYF2O95926 243 aaKnown RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 RARAP10276 462 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 CYP3A5P20815 502 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms