RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 AOPEPQ8N6M6 819 aa17.98■□□□□ 0.47
SFN-201ENST00000339276 MAFAQ8NHW3 353 aaPredicted RBP17.98■□□□□ 0.47
SFN-201ENST00000339276 PPP2R3CQ969Q6 453 aa17.98■□□□□ 0.47
SFN-201ENST00000339276 EMILIN2Q9BXX0 1053 aa17.98■□□□□ 0.47
SFN-201ENST00000339276 NAT10Q9H0A0 1025 aaKnown RBP17.98■□□□□ 0.47
SFN-201ENST00000339276 IGFLR1Q9H665 355 aa17.98■□□□□ 0.47
SFN-201ENST00000339276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.98■□□□□ 0.47
SFN-201ENST00000339276 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.98■□□□□ 0.47
SFN-201ENST00000339276 MTRRQ9UBK8 725 aa17.98■□□□□ 0.47
SFN-201ENST00000339276 L1RE1Q9UN81 338 aa17.98■□□□□ 0.47
SFN-201ENST00000339276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.98■□□□□ 0.47
SFN-201ENST00000339276 PLXNA3P51805 1871 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 ADAM12O43184 909 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 CLASP2O75122 1294 aaKnown RBP17.97■□□□□ 0.47
SFN-201ENST00000339276 STAU1O95793 577 aaKnown RBP17.97■□□□□ 0.47
SFN-201ENST00000339276 CYP11A1P05108 521 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 MTIF2P46199 727 aaKnown RBP17.97■□□□□ 0.47
SFN-201ENST00000339276 MYL7Q01449 175 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 YWHAHQ04917 246 aaPredicted RBP17.97■□□□□ 0.47
SFN-201ENST00000339276 MRPL58Q14197 206 aaKnown RBP17.97■□□□□ 0.47
SFN-201ENST00000339276 NCAPHQ15003 741 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 WDR72Q3MJ13 1102 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 WSCD1Q658N2 575 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 OVOS1Q6IE37 1185 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 SPOPLQ6IQ16 392 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 PDCL2Q8N4E4 241 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 SEMA4DQ92854 862 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 CLSTN3Q9BQT9 956 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 PI4K2AQ9BTU6 479 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 FANCLQ9NW38 375 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 FNIP2Q9P278 1114 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 MAGEC2Q9UBF1 373 aaPredicted RBP17.97■□□□□ 0.47
SFN-201ENST00000339276 POLIQ9UNA4 740 aa17.97■□□□□ 0.47
SFN-201ENST00000339276 ARHGEF37A1IGU5 675 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 KCNJ18B7U540 433 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 LINC01565O15544 149 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 HUS1O60921 280 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 OAZ2O95190 189 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 ASS1P00966 412 aaKnown RBP17.96■□□□□ 0.46
SFN-201ENST00000339276 AFPP02771 609 aaKnown RBP17.96■□□□□ 0.46
SFN-201ENST00000339276 ADH1AP07327 375 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 NDUFV1P49821 464 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 RBM10P98175 930 aaKnown RBP17.96■□□□□ 0.46
SFN-201ENST00000339276 CREMQ03060 361 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 KCNH2Q12809 1159 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 KCNJ12Q14500 433 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 SOWAHAQ2M3V2 549 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 CTXN3Q4LDR2 81 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 CDKAL1Q5VV42 579 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 ZNF280DQ6N043 979 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 FBXL13Q8NEE6 735 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 VN1R2Q8NFZ6 395 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 MMS19Q96T76 1030 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 BPIFA3Q9BQP9 254 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 VRTNQ9H8Y1 702 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 NXF1Q9UBU9 619 aaKnown RBP17.96■□□□□ 0.46
SFN-201ENST00000339276 DSEQ9UL01 958 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 BACE2Q9Y5Z0 518 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 CDY1Q9Y6F8 540 aa17.96■□□□□ 0.46
SFN-201ENST00000339276 H7C4K7 107 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 TBC1D4O60343 1298 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 KLRC2P26717 231 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 ZNF165P49910 485 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 TNNC1P63316 161 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 SGSM1Q2NKQ1 1148 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 ZNF667Q5HYK9 610 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 LLGL2Q6P1M3 1020 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 SCARA5Q6ZMJ2 495 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 LIMS2Q7Z4I7 341 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 METTL23Q86XA0 190 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 DHX40Q8IX18 779 aaKnown RBP17.95■□□□□ 0.46
SFN-201ENST00000339276 TOP6BLQ8N6T0 577 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 CDCA3Q99618 268 aaPredicted RBP17.95■□□□□ 0.46
SFN-201ENST00000339276 RTP3Q9BQQ7 232 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 IMPG2Q9BZV3 1241 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 APOBEC3GQ9HC16 384 aaKnown RBP17.95■□□□□ 0.46
SFN-201ENST00000339276 RAB20Q9NX57 234 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 FBXL5Q9UKA1 691 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 COQ4Q9Y3A0 265 aa17.95■□□□□ 0.46
SFN-201ENST00000339276 N4BP1O75113 896 aaKnown RBP17.94■□□□□ 0.46
SFN-201ENST00000339276 GLP2RO95838 553 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 EPCAMP16422 314 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 EEF1GP26641 437 aaKnown RBP17.94■□□□□ 0.46
SFN-201ENST00000339276 OR1D2P34982 312 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 CLCN4P51793 760 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 NOP14P78316 857 aaKnown RBP17.94■□□□□ 0.46
SFN-201ENST00000339276 SKIV2LQ15477 1246 aaKnown RBP17.94■□□□□ 0.46
SFN-201ENST00000339276 MAN2A1Q16706 1144 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 TCP11X2Q5H9J9 407 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 OSTM1Q86WC4 334 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 PALB2Q86YC2 1186 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 ADGRF2Q8IZF7 708 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 EFHBQ8N7U6 833 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 SLC22A17Q8WUG5 538 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 KBTBD7Q8WVZ9 684 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 TAF4BQ92750 862 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 HSD3B7Q9H2F3 369 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 SMYD3Q9H7B4 428 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 HCFC2Q9Y5Z7 792 aa17.94■□□□□ 0.46
SFN-201ENST00000339276 HCRTO43612 131 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms