RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 MRPL4Q9BYD3 311 aaKnown RBP9.4□□□□□ -0.9
SNCA-201ENST00000336904 NIFKQ9BYG3 293 aaKnown RBP9.4□□□□□ -0.9
SNCA-201ENST00000336904 FAM49AQ9H0Q0 323 aaPredicted RBP9.4□□□□□ -0.9
SNCA-201ENST00000336904 SDCBP2Q9H190 292 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 UVRAGQ9P2Y5 699 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 MEFVO15553 781 aaPredicted RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 TOM1L1O75674 476 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 KRT1P04264 644 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 CYP1A1P04798 512 aaPredicted RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 PLCB3Q01970 1234 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 CENPCQ03188 943 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 PTGISQ16647 500 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 SH3PXD2AQ5TCZ1 1133 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 MFSD7Q6UXD7 560 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 WDTC1Q8N5D0 677 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 RAPGEF5Q92565 580 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 CDC42EP4Q9H3Q1 356 aaKnown RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 FEZ2Q9UHY8 353 aaPredicted RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 FAM169AQ9Y6X4 670 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 LRRD1A4D1F6 860 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 PPFIA2O75334 1257 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 CD48P09326 243 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 HOXC6P09630 235 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 EDNRBP24530 442 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 RTP1P59025 263 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 SNRPFP62306 86 aaKnown RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 CALCOCO2Q13137 446 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 DHX34Q14147 1143 aaKnown RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 CDO1Q16878 200 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 SPRED3Q2MJR0 410 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 SLFN12LQ6IEE8 588 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 ARMCX2Q7L311 632 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 ERO1BQ86YB8 467 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 FMNL3Q8IVF7 1028 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 BRSK2Q8IWQ3 736 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 ZBTB8OSQ8IWT0 167 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 ANKRD42Q8N9B4 389 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 PIWIL1Q96J94 861 aaKnown RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 CCT8L2Q96SF2 557 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 CDT1Q9H211 546 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 AAASQ9NRG9 546 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 DNPEPQ9ULA0 475 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 HMGB1P1B2RPK0 211 aaPredicted RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 BHMG1C9JSJ3 638 aaPredicted RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 EBAG9O00559 213 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 PROSCO94903 275 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 ASS1P00966 412 aaKnown RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 HADHBP55084 474 aaKnown RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 PTP4A2Q12974 167 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 IFT88Q13099 833 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 FASTKD3Q14CZ7 662 aaKnown RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 JADE1Q6IE81 842 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 NLRP14Q86W24 1093 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 ANKRD13AQ8IZ07 590 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 C12orf29Q8N999 325 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 MYCBPAPQ8TBZ2 947 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 ZNF473Q8WTR7 871 aaKnown RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 SEC14L1Q92503 715 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 THOC1Q96FV9 657 aaKnown RBP9.39□□□□□ -0.91
SNCA-201ENST00000336904 OSBPL8Q9BZF1 889 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 AGTPBP1Q9UPW5 1226 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 STYXL1Q9Y6J8 313 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 PASKQ96RG2 1323 aa9.39□□□□□ -0.91
SNCA-201ENST00000336904 LACTBL1A8MY62 500 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 OGTO15294 1046 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 STAM2O75886 525 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 ERLIN2O94905 339 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 CHN1P15882 459 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 RFC1P35251 1148 aaPredicted RBP9.38□□□□□ -0.91
SNCA-201ENST00000336904 RGS7P49802 495 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 PPP2R2AP63151 447 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 LACTBP83111 547 aaPredicted RBP9.38□□□□□ -0.91
SNCA-201ENST00000336904 SKOR1P84550 965 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 KIZQ2M2Z5 673 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 LIN9Q5TKA1 542 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 DNAJC24Q6P3W2 148 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 MICALL1Q8N3F8 863 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 NETO2Q8NC67 525 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 GDAP1Q8TB36 358 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 TMEM121Q9BTD3 319 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 DCLK3Q9C098 648 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 PABPC3Q9H361 631 aaKnown RBP9.38□□□□□ -0.91
SNCA-201ENST00000336904 SYNCQ9H7C4 482 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 ABLIM1O14639 778 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 PPEF2O14830 753 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 RGS16O15492 202 aaPredicted RBP9.38□□□□□ -0.91
SNCA-201ENST00000336904 RIPK2O43353 540 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 MTA2O94776 668 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 CETPP11597 493 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 ADORA2AP29274 412 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 EPHX2P34913 555 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 ASPAP45381 313 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 CLDN10P78369 228 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 MOGSQ13724 837 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 DUOXA2Q1HG44 320 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 PTPN20Q4JDL3 420 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 KIAA0319LQ8IZA0 1049 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 FEZF2Q8TBJ5 459 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms