RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TMEM143Q96AN5 459 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 PDGFDQ9GZP0 370 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 WDR91A4D1P6 747 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 MAGEA4P43358 317 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 NCKAP1LP55160 1127 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 LACTBP83111 547 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 ROR2Q01974 943 aaKnown RBP17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 VSTM1Q6UX27 236 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 MAGEC3Q8TD91 643 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 ATP6V0A1Q93050 837 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 PDCD2LQ9BRP1 358 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 MRPL47Q9HD33 250 aaKnown RBP17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 ZNF831Q5JPB2 1677 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 CFHP08603 1231 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 SLC1A1P43005 524 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 TAS2R40P59535 323 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 GPS1Q13098 491 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 MPP2Q14168 576 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 ANKRD20A2Q5SQ80 823 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 ANKRD20A1Q5TYW2 823 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 ANKRD20A3Q5VUR7 823 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 MFSD5Q6N075 450 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 CLEC4DQ8WXI8 215 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 TRIM11Q96F44 468 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 TMEM109Q9BVC6 243 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 IMPG2Q9BZV3 1241 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 POLR3FQ9H1D9 316 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 ETNK1Q9HBU6 452 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 MROH7Q68CQ1 1323 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 KRT1P04264 644 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 SETSIPP0DME0 302 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 NQO1P15559 274 aaKnown RBP17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 CA4P22748 312 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 SFNP31947 248 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 FBF1Q8TES7 1133 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 RBM41Q96IZ5 413 aaKnown RBP17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 UBE2OQ9C0C9 1292 aaKnown RBP17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 MMADHCQ9H3L0 296 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 RHBDL2Q9NX52 303 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 CFAP73A6NFT4 308 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 SGK1O00141 431 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 PIAS1O75925 651 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 GSTA1P08263 222 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 ALDH5A1P51649 535 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 ARSEP51690 589 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 COPS2P61201 443 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 CAV1Q03135 178 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 TMEM132AQ24JP5 1023 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 ILDR2Q71H61 639 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 MFN1Q8IWA4 741 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 DDX1Q92499 740 aaKnown RBP17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 ZBTB45Q96K62 511 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 GORASP1Q9BQQ3 440 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 MOV10L1Q9BXT6 1211 aaKnown RBP17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 ANKEF1Q9NU02 776 aa17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 AGO2Q9UKV8 859 aaKnown RBP17.46■□□□□ 0.39
CDC42EP4-201ENST00000335793 ZNF536O15090 1300 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 TPD52L2O43399 206 aaKnown RBP17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 PROSCO94903 275 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 ETS1P14921 441 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 ATP11AP98196 1134 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 PTK6Q13882 451 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZNF449Q6P9G9 518 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 BBOF1Q8ND07 529 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 DEPTORQ8TB45 409 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 TMC2Q8TDI7 906 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 RNF146Q9NTX7 359 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 SLC5A4Q9NY91 659 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 AGTPBP1Q9UPW5 1226 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 NEU2Q9Y3R4 380 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 PTGER2P43116 358 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 SNRPFP62306 86 aaKnown RBP17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 MTMR2Q13614 643 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 CUL3Q13618 768 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 BLMHQ13867 455 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 PPP1R21Q6ZMI0 780 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 ENOSF1Q7L5Y1 443 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 NCAPG2Q86XI2 1143 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZBED8Q8IZ13 594 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 PHACTR1Q9C0D0 580 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 K7ERI5 159 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 ATP2A1O14983 1001 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 NR3C2P08235 984 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 STYK1Q6J9G0 422 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 SLC39A4Q6P5W5 647 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 ANKMY2Q8IV38 441 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 GBP7Q8N8V2 638 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 FLAD1Q8NFF5 587 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 CKAP2Q8WWK9 683 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 OCEL1Q9H607 264 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 RBAKQ9NYW8 714 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 SYNPO2Q9UMS6 1093 aa17.45■□□□□ 0.38
CDC42EP4-201ENST00000335793 CETPP11597 493 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 NLRP11P59045 1033 aaKnown RBP17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 MTA1Q13330 715 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 SYDE1Q6ZW31 735 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 FITM2Q8N6M3 262 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 C12orf50Q8NA57 414 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 CFAP57Q96MR6 1250 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 SMC6Q96SB8 1091 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms