RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 INTS2Q9H0H0 1204 aaKnown RBP15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 LMAN2LQ9H0V9 348 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 APOBEC3GQ9HC16 384 aaKnown RBP15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 ENTPD7Q9NQZ7 604 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 TLR9Q9NR96 1032 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 CHST7Q9NS84 486 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 GCNT4Q9P109 453 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 GTPBP10A4D1E9 387 aaKnown RBP15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 LGALS16A8MUM7 142 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 C2CD2LO14523 706 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 LPXNO60711 386 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 CXCL14O95715 111 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 URODP06132 367 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 CTSAP10619 480 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 P4HA1P13674 534 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 TYMPP19971 482 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 GLUD2P49448 558 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 FANCCQ00597 558 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 DSG1Q02413 1049 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 CAMK1Q14012 370 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 BMS1Q14692 1282 aaKnown RBP15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 PTPROQ16827 1216 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 EXOC3L4Q17RC7 722 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 FILIP1LQ4L180 1135 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 FKBP15Q5T1M5 1219 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 KIAA0319Q5VV43 1072 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 PLPP4Q5VZY2 271 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 SCARA5Q6ZMJ2 495 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 METTL23Q86XA0 190 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 TOP6BLQ8N6T0 577 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 LMO3Q8TAP4 145 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 MICAL1Q8TDZ2 1067 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 RIN2Q8WYP3 895 aaPredicted RBP15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 TATDN2Q93075 761 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 MRPL17Q9NRX2 175 aaKnown RBP15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 DSEQ9UL01 958 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 L1RE1Q9UN81 338 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 VWA8A3KMH1 1905 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 FSCN2O14926 492 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 SLC9A1P19634 815 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 IRS1P35568 1242 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 FXR1P51114 621 aaKnown RBP eCLIP15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 UBXN1Q04323 297 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 YWHAHQ04917 246 aaPredicted RBP15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 SMC1AQ14683 1233 aaKnown RBP15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 SOWAHAQ2M3V2 549 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 VARS2Q5ST30 1063 aaKnown RBP15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 WSCD1Q658N2 575 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 PRSS55Q6UWB4 352 aaPredicted RBP15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 Q7L0L9 218 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 PDCL2Q8N4E4 241 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 NT5C1BQ96P26 610 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 NIF3L1Q9GZT8 377 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 NGRNQ9NPE2 291 aaKnown RBP15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 SSX2IPQ9Y2D8 614 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 PCDHGC5Q9Y5F6 944 aa15.1■□□□□ 0.01
APOBEC3B-202ENST00000335760 CHD7Q9P2D1 2997 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 CYP11A1P05108 521 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 PON1P27169 355 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 ASPAP45381 313 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 RAP1GAPP47736 663 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 KCNMA1Q12791 1236 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 PTPN14Q15678 1187 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 OVOS1Q6IE37 1185 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 PDE12Q6L8Q7 609 aaKnown RBP15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 ANKS3Q6ZW76 656 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 DPH6Q7L8W6 267 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 LIMS2Q7Z4I7 341 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 ADGRF2Q8IZF7 708 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 TMEM86AQ8N2M4 240 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 LNX1Q8TBB1 728 aaPredicted RBP15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 PIK3R5Q8WYR1 880 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 MRPL38Q96DV4 380 aaKnown RBP15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 NAP1L5Q96NT1 182 aaPredicted RBP15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 SMYD3Q9H7B4 428 aa15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 RTN4Q9NQC3 1192 aaKnown RBP15.09■□□□□ 0.01
APOBEC3B-202ENST00000335760 TSC2P49815 1807 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 A0A1B0GTH6 734 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 HIDE1A8MVS5 230 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 H7C4K7 107 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 TEX33O43247 280 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 LILRB3O75022 631 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 WEE2P0C1S8 567 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 RPL17P18621 184 aaKnown RBP15.08■□□□□ 0
APOBEC3B-202ENST00000335760 CDH8P55286 799 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 UBASH3AP57075 661 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 APBA1Q02410 837 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 MRPL58Q14197 206 aaKnown RBP15.08■□□□□ 0
APOBEC3B-202ENST00000335760 PSMD5Q16401 504 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 CTXN3Q4LDR2 81 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 PDXDC1Q6P996 788 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 TRIM65Q6PJ69 517 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 ARHGEF19Q8IW93 802 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 MRPL43Q8N983 215 aaKnown RBP15.08■□□□□ 0
APOBEC3B-202ENST00000335760 PCMTD1Q96MG8 357 aaPredicted RBP15.08■□□□□ 0
APOBEC3B-202ENST00000335760 MRPL45Q9BRJ2 306 aaKnown RBP15.08■□□□□ 0
APOBEC3B-202ENST00000335760 LSM14BQ9BX40 385 aaKnown RBP15.08■□□□□ 0
APOBEC3B-202ENST00000335760 SDCBP2Q9H190 292 aa15.08■□□□□ 0
APOBEC3B-202ENST00000335760 SNX25Q9H3E2 840 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms