RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 NT5C1BQ96P26 610 aa18.77■□□□□ 0.59
CHGA-202ENST00000334654 ARID3AQ99856 593 aa18.77■□□□□ 0.59
CHGA-202ENST00000334654 LSM14BQ9BX40 385 aaKnown RBP18.77■□□□□ 0.59
CHGA-202ENST00000334654 TRIM5Q9C035 493 aa18.77■□□□□ 0.59
CHGA-202ENST00000334654 NIF3L1Q9GZT8 377 aa18.77■□□□□ 0.59
CHGA-202ENST00000334654 SMYD3Q9H7B4 428 aa18.77■□□□□ 0.59
CHGA-202ENST00000334654 GRPEL1Q9HAV7 217 aa18.77■□□□□ 0.59
CHGA-202ENST00000334654 CHST7Q9NS84 486 aa18.77■□□□□ 0.59
CHGA-202ENST00000334654 PCDHB8Q9UN66 801 aa18.77■□□□□ 0.59
CHGA-202ENST00000334654 TIMM13Q9Y5L4 95 aaPredicted RBP18.77■□□□□ 0.59
CHGA-202ENST00000334654 SF3B1O75533 1304 aaKnown RBP eCLIP18.77■□□□□ 0.59
CHGA-202ENST00000334654 EPOPA6NHQ4 379 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 SOX1O00570 391 aaPredicted RBP18.76■□□□□ 0.59
CHGA-202ENST00000334654 CBFA2T2O43439 604 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 TRAPPC3O43617 180 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 DNAJB1P25685 340 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 TKTP29401 623 aaKnown RBP18.76■□□□□ 0.59
CHGA-202ENST00000334654 ZNF75DP51815 510 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 CDH8P55286 799 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 WSCD1Q658N2 575 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 RRAGAQ7L523 313 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 DPH6Q7L8W6 267 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 PDCL2Q8N4E4 241 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 TOP6BLQ8N6T0 577 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 UBR7Q8N806 425 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 KBTBD7Q8WVZ9 684 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 B3GALT6Q96L58 329 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 NAA15Q9BXJ9 866 aaKnown RBP18.76■□□□□ 0.59
CHGA-202ENST00000334654 CERS4Q9HA82 394 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 ALG13Q9NP73 1137 aaKnown RBP18.76■□□□□ 0.59
CHGA-202ENST00000334654 APEX2Q9UBZ4 518 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 NME7Q9Y5B8 376 aa18.76■□□□□ 0.59
CHGA-202ENST00000334654 H3BNC9 293 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 GABRDO14764 452 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 TACC1O75410 805 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 SOD2P04179 222 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 WEE2P0C1S8 567 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 TYMPP19971 482 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 GCNT1Q02742 428 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 ELAVL2Q12926 359 aaKnown RBP18.75■□□□□ 0.59
CHGA-202ENST00000334654 CUL2Q13617 745 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 CAMK1Q14012 370 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 MRPL58Q14197 206 aaKnown RBP18.75■□□□□ 0.59
CHGA-202ENST00000334654 RTP2Q5QGT7 225 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 FAM171A1Q5VUB5 890 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 SCARA5Q6ZMJ2 495 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 CCDC150Q8NCX0 1101 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 MMS19Q96T76 1030 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 MRPL45Q9BRJ2 306 aaKnown RBP18.75■□□□□ 0.59
CHGA-202ENST00000334654 UBE2TQ9NPD8 197 aaPredicted RBP18.75■□□□□ 0.59
CHGA-202ENST00000334654 FAM207AQ9NSI2 230 aaPredicted RBP18.75■□□□□ 0.59
CHGA-202ENST00000334654 LZTS1Q9Y250 596 aa18.75■□□□□ 0.59
CHGA-202ENST00000334654 ATG2AQ2TAZ0 1938 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 SYN3O14994 580 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 GRM6O15303 877 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 HUS1O60921 280 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 FAM163BP0C2L3 166 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 ODC1P11926 461 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 UCHL3P15374 230 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 ACO1P21399 889 aaKnown RBP18.74■□□□□ 0.59
CHGA-202ENST00000334654 RAP1GAPP47736 663 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 TNNC1P63316 161 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 KRT17Q04695 432 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 KIAA0319Q5VV43 1072 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 IQCEQ6IPM2 695 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
CHGA-202ENST00000334654 OSTM1Q86WC4 334 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 PPM1KQ8N3J5 372 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 APPL2Q8NEU8 664 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 FBXO22Q8NEZ5 403 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 RTP3Q9BQQ7 232 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 HERC2P3Q9BVR0 1158 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 TTYH3Q9C0H2 523 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 FHOD1Q9Y613 1164 aa18.74■□□□□ 0.59
CHGA-202ENST00000334654 USP41Q3LFD5 358 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 VSTM4Q8IW00 320 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 VPS52Q8N1B4 723 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 TMEM86AQ8N2M4 240 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 WHAMMQ8TF30 809 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 MRFAP1L1Q96HT8 127 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 TTPALQ9BTX7 342 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 C11orf84Q9BUA3 381 aaPredicted RBP18.73■□□□□ 0.59
CHGA-202ENST00000334654 GPR88Q9GZN0 384 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 ZBP1Q9H171 429 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 CYP3A43Q9HB55 503 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 FBXL5Q9UKA1 691 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 DNAJC12Q9UKB3 198 aa18.73■□□□□ 0.59
CHGA-202ENST00000334654 RNF225M0QZC1 329 aaPredicted RBP18.72■□□□□ 0.59
CHGA-202ENST00000334654 HCRTO43612 131 aa18.72■□□□□ 0.59
CHGA-202ENST00000334654 TBC1D4O60343 1298 aa18.72■□□□□ 0.59
CHGA-202ENST00000334654 LILRB3O75022 631 aa18.72■□□□□ 0.59
CHGA-202ENST00000334654 OAZ2O95190 189 aa18.72■□□□□ 0.59
CHGA-202ENST00000334654 P4HA1P13674 534 aa18.72■□□□□ 0.59
CHGA-202ENST00000334654 WARSP23381 471 aaKnown RBP18.72■□□□□ 0.59
CHGA-202ENST00000334654 TBXAS1P24557 533 aaPredicted RBP18.72■□□□□ 0.59
CHGA-202ENST00000334654 ERVFC1P60507 584 aa18.72■□□□□ 0.59
CHGA-202ENST00000334654 DSG1Q02413 1049 aa18.72■□□□□ 0.59
CHGA-202ENST00000334654 UBE3AQ05086 875 aa18.72■□□□□ 0.59
CHGA-202ENST00000334654 INCA1Q0VD86 236 aa18.72■□□□□ 0.59
CHGA-202ENST00000334654 GPM6BQ13491 265 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms