RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 STAMBPO95630 424 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 TROVE2P10155 538 aaKnown RBP eCLIP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 ATF2P15336 505 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 FBXO46Q6PJ61 603 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 GBP5Q96PP8 586 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 HTATIP2Q9BUP3 242 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 ZNF148Q9UQR1 794 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 WDR91A4D1P6 747 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 TRIM32Q13049 653 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 CAPSQ13938 189 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 CLUL1Q15846 466 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 ZNF394Q53GI3 561 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 ZNF507Q8TCN5 953 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 LRRC8CQ8TDW0 803 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 ZNF560Q96MR9 790 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 YIPF3Q9GZM5 350 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 R3HDMLQ9H3Y0 253 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 DNAJC12Q9UKB3 198 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 CAPN6Q9Y6Q1 641 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 SCN4AP35499 1836 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 SMIM35A0A1B0GVV1 85 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 A6NJR5 290 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 RGS20O76081 388 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 ZNF18P17022 549 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 IRF5Q13568 498 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 CENPPQ6IPU0 288 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 ZPBP2Q6X784 338 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 CBWD2Q8IUF1 395 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 NACA2Q9H009 215 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 SLC38A7Q9NVC3 462 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 RBP5P82980 135 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 IFRD2Q12894 506 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-201ENST00000334136 WDR72Q3MJ13 1102 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 SGO2Q562F6 1265 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 WDR93Q6P2C0 686 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 TRAPPC11Q7Z392 1133 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 CFAP61Q8NHU2 1237 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 CEP72Q9P209 647 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 TXNDC16Q9P2K2 825 aa12.5□□□□□ -0.41
HDAC6-201ENST00000334136 CCDC188H7C350 402 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 TMED2Q15363 201 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 THEM5Q8N1Q8 247 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 SPDL1Q96EA4 605 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 NOP53Q9NZM5 478 aaKnown RBP12.49□□□□□ -0.41
HDAC6-201ENST00000334136 EIF3BP55884 814 aaKnown RBP12.49□□□□□ -0.41
HDAC6-201ENST00000334136 ARSHQ5FYA8 562 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 HDAC7Q8WUI4 952 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 HEXIM2Q96MH2 286 aaKnown RBP12.49□□□□□ -0.41
HDAC6-201ENST00000334136 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 INTUQ9ULD6 942 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 TRAPPC3O43617 180 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 CD4P01730 458 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 ELF1P32519 619 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 SARSP49591 514 aaKnown RBP12.49□□□□□ -0.41
HDAC6-201ENST00000334136 POLE2P56282 527 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 SPIRE1Q08AE8 756 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 SLC27A1Q6PCB7 646 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 ZNF653Q96CK0 615 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 DHX33Q9H6R0 707 aaKnown RBP12.49□□□□□ -0.41
HDAC6-201ENST00000334136 INTS13Q9NVM9 706 aa12.49□□□□□ -0.41
HDAC6-201ENST00000334136 ARHGAP42A6NI28 874 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 TADA2AO75478 443 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 ABL1P00519 1130 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 BMP6P22004 513 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 AXLP30530 894 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 CASP4P49662 377 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 GJA9P57773 515 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 PTENP60484 403 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 ZNF200P98182 395 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 IL9RQ01113 521 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 NCOA4Q13772 614 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 RPUSD2Q8IZ73 545 aaKnown RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 KIRREL3Q8IZU9 778 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 ADAM2Q99965 735 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 TMEM134Q9H6X4 195 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 FAM155AB1AL88 458 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 ECEL1O95672 775 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 OR1G1P47890 313 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 CRYBB1P53674 252 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 RTP1P59025 263 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 GHRHRQ02643 423 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 MOGSQ13724 837 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 CFAP157Q5JU67 520 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 SDCCAG8Q86SQ7 713 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 RNF34Q969K3 372 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 ZBTB10Q96DT7 871 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 ZBTB45Q96K62 511 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 INTS2Q9H0H0 1204 aaKnown RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 HIPK3Q9H422 1215 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 SUFUQ9UMX1 484 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 NOC2LQ9Y3T9 749 aaKnown RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 PCDHA2Q9Y5H9 948 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 SNX9Q9Y5X1 595 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 ECM29Q5VYK3 1845 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 TTI1O43156 1089 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 PDHA1P08559 390 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 ZNF865P0CJ78 1059 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms