RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 CCDC149Q6ZUS6 474 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 TRAPPC11Q7Z392 1133 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 GPR149Q86SP6 731 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 THEM5Q8N1Q8 247 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 OR5B17Q8NGF7 314 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 TSG101Q99816 390 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 PHF7Q9BWX1 381 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-201ENST00000332345 ZDHHC7Q9NXF8 308 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 FBXW11Q9UKB1 542 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 MAFFQ9ULX9 164 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 C5orf42Q9H799 3197 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 GOLGA6L22H0YM25 854 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 HUS1O60921 280 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 PHACTR2O75167 634 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 ZMYND10O75800 440 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 ABLIM3O94929 683 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 CYP11A1P05108 521 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 PSMC2P35998 433 aaKnown RBP15.09■□□□□ 0.01
LIMS1-201ENST00000332345 CASP4P49662 377 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 BFSP1Q12934 665 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 EDRF1Q3B7T1 1238 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 ISM2Q6H9L7 571 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 CENPPQ6IPU0 288 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 CXorf38Q8TB03 319 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 TMC2Q8TDI7 906 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 PARD3BQ8TEW8 1205 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 BORCS6Q96GS4 357 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 DHTKD1Q96HY7 919 aaPredicted RBP15.09■□□□□ 0.01
LIMS1-201ENST00000332345 HPDLQ96IR7 371 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 RHOBTB2Q9BYZ6 727 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 PIDD1Q9HB75 910 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 SIX4Q9UIU6 781 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 MAN1B1Q9UKM7 699 aa15.09■□□□□ 0.01
LIMS1-201ENST00000332345 PSMA7O14818 248 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 IKBKBO14920 756 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 CETN3O15182 167 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 RFPL2O75678 378 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 HNRNPA1P09651 372 aaKnown RBP eCLIP15.08■□□□□ 0
LIMS1-201ENST00000332345 KRT13P13646 458 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 ATF2P15336 505 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 SSTR3P32745 418 aaPredicted RBP15.08■□□□□ 0
LIMS1-201ENST00000332345 CLDN10P78369 228 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 ROR1Q01973 937 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 TRPC3Q13507 836 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 PPM1LQ5SGD2 360 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 ADSSL1Q8N142 457 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 GJD3Q8N144 294 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 TMEM86AQ8N2M4 240 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 NECAB3Q96P71 396 aaPredicted RBP15.08■□□□□ 0
LIMS1-201ENST00000332345 PRKD2Q9BZL6 878 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 GDAP2Q9NXN4 497 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 KIAA1468Q9P260 1216 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 NR2E1Q9Y466 385 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 PTPRJQ12913 1337 aa15.08■□□□□ 0
LIMS1-201ENST00000332345 WDR27A2RRH5 827 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 C19orf67A6NJJ6 358 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 TNFRSF10AO00220 468 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 PRRG1O14668 218 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 XYLBO75191 536 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 PAPLNO95428 1278 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 CST3P01034 146 aaPredicted RBP15.07■□□□□ 0
LIMS1-201ENST00000332345 C8AP07357 584 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 WEE2P0C1S8 567 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 CPB1P15086 417 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 HOXA9P31269 272 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 FKBP3Q00688 224 aaKnown RBP15.07■□□□□ 0
LIMS1-201ENST00000332345 ZP2Q05996 745 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 LRRC63Q05C16 580 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 ENPEPQ07075 957 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 CAMK4Q16566 473 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 ZCWPW2Q504Y3 356 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 WSCD1Q658N2 575 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 ANKRD40Q6AI12 368 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 INTS8Q75QN2 995 aaKnown RBP15.07■□□□□ 0
LIMS1-201ENST00000332345 DPH6Q7L8W6 267 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 FAM186BQ8IYM0 893 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 TRIML1Q8N9V2 468 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 SMG7Q92540 1137 aaKnown RBP15.07■□□□□ 0
LIMS1-201ENST00000332345 ZNF516Q92618 1163 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 CYP4F11Q9HBI6 524 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 LMBRD1Q9NUN5 540 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 AFF4Q9UHB7 1163 aaKnown RBP15.07■□□□□ 0
LIMS1-201ENST00000332345 SNX9Q9Y5X1 595 aa15.07■□□□□ 0
LIMS1-201ENST00000332345 LRRIQ3A6PVS8 624 aaPredicted RBP15.06■□□□□ 0
LIMS1-201ENST00000332345 BIN1O00499 593 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 AKAP3O75969 853 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 C4BPAP04003 597 aaKnown RBP15.06■□□□□ 0
LIMS1-201ENST00000332345 CCNE1P24864 410 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 ATICP31939 592 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 VAMP7P51809 220 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 ADCY1Q08828 1119 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 SMARCB1Q12824 385 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 GPR17Q13304 367 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 BIRC3Q13489 604 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 MORC3Q14149 939 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 TCEAL8Q8IYN2 117 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 TOP6BLQ8N6T0 577 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 SLC7A14Q8TBB6 771 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 SPATA18Q8TC71 538 aa15.06■□□□□ 0
LIMS1-201ENST00000332345 PLEKHO2Q8TD55 490 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms