RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 CICQ96RK0 1608 aaPredicted RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 PABPN1LA6NDY0 278 aaKnown RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 FZD9O00144 591 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 PDE2AO00408 941 aaPredicted RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 LGALS2P05162 132 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 HOXD10P28358 340 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 RGS2P41220 211 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 MAGEA9P43362 315 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 PSMD6Q15008 389 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 GRIK4Q16099 956 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 PRAMEF19Q5SWL8 479 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ACOT1Q86TX2 421 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 SLC9A9Q8IVB4 645 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 THEM5Q8N1Q8 247 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ZNF606Q8WXB4 792 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 MBOAT7Q96N66 472 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 SIK2Q9H0K1 926 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 METTL5Q9NRN9 209 aaKnown RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 PJA2O43164 708 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 MT-ND3P03897 115 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 EIF3EP60228 445 aaKnown RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 IL9RQ01113 521 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 TSPY1Q01534 308 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 PDIA2Q13087 525 aaKnown RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 ZBED8Q8IZ13 594 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 RCOR2Q8IZ40 523 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 GPBP1L1Q9HC44 474 aaPredicted RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 WRAP73Q9P2S5 460 aaPredicted RBP10.05□□□□□ -0.8
SS18L1-201ENST00000331758 AFG3L2Q9Y4W6 797 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 NFASCO94856 1347 aa10.05□□□□□ -0.8
SS18L1-201ENST00000331758 CST8O60676 142 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 LYPLA2O95372 231 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 GLI1P08151 1106 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 HNRNPH3P31942 346 aaKnown RBP10.04□□□□□ -0.8
SS18L1-201ENST00000331758 PRKCIP41743 596 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 PLA2G4AP47712 749 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 SPIRE1Q08AE8 756 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 CAPSQ13938 189 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 SMAD1Q15797 465 aaKnown RBP10.04□□□□□ -0.8
SS18L1-201ENST00000331758 KCNT1Q5JUK3 1230 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 WDR93Q6P2C0 686 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 BRSK2Q8IWQ3 736 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 EPS8L1Q8TE68 723 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 CASKIN2Q8WXE0 1202 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 RILPQ96NA2 401 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 KLC2Q9H0B6 622 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 VTA1Q9NP79 307 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 CNTNAP1P78357 1384 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 PLCH1Q4KWH8 1693 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 SPDYE5A6NIY4 337 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 TLR2O60603 784 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 CD4P01730 458 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 TROVE2P10155 538 aaKnown RBP eCLIP10.04□□□□□ -0.81e-7■□□□□ 9.3
SS18L1-201ENST00000331758 KRT10P13645 584 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 KCNA2P16389 499 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 GCNT1Q02742 428 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 ACVR2BQ13705 512 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 ABHD15Q6UXT9 468 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 IRF2BP2Q7Z5L9 587 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 CREG2Q8IUH2 290 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 EMC1Q8N766 993 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 DNAJB3Q8WWF6 145 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 ATP6V1G3Q96LB4 118 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 ZIM3Q96PE6 472 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 NCAPGQ9BPX3 1015 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 LCMT1Q9UIC8 334 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 A0A0A6YYK5 440 aaPredicted RBP10.04□□□□□ -0.8
SS18L1-201ENST00000331758 C17orf102A2RUQ5 167 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 RASA4BC9J798 803 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 RASA4O43374 803 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 GABPB2Q8TAK5 448 aaPredicted RBP10.04□□□□□ -0.8
SS18L1-201ENST00000331758 TBC1D31Q96DN5 1066 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 ISCUQ9H1K1 167 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 KLHL8Q9P2G9 620 aaPredicted RBP10.04□□□□□ -0.8
SS18L1-201ENST00000331758 CAPN7Q9Y6W3 813 aa10.04□□□□□ -0.8
SS18L1-201ENST00000331758 ZNF263O14978 683 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 MOCS2O96007 188 aaPredicted RBP10.03□□□□□ -0.8
SS18L1-201ENST00000331758 GNL1P36915 607 aaPredicted RBP10.03□□□□□ -0.8
SS18L1-201ENST00000331758 CAV1Q03135 178 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 GOLGA7BQ2TAP0 167 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 P3H1Q32P28 736 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 ABRAQ8N0Z2 381 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 BSNDQ8WZ55 320 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 CCDC97Q96F63 343 aaPredicted RBP10.03□□□□□ -0.8
SS18L1-201ENST00000331758 CNOT10Q9H9A5 744 aaKnown RBP10.03□□□□□ -0.8
SS18L1-201ENST00000331758 SNCAIPQ9Y6H5 919 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 ATP8B3O60423 1300 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 IRS2Q9Y4H2 1338 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 MAP3K6O95382 1288 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 STAMBPO95630 424 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 COILP38432 576 aaPredicted RBP10.03□□□□□ -0.8
SS18L1-201ENST00000331758 ROR1Q01973 937 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 BYSLQ13895 437 aaKnown RBP10.03□□□□□ -0.8
SS18L1-201ENST00000331758 STILQ15468 1287 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 CLEC16AQ2KHT3 1053 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 NUGGCQ68CJ6 796 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 CEP120Q8N960 986 aa10.03□□□□□ -0.8
SS18L1-201ENST00000331758 ARHGEF2Q92974 986 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms