RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 SGSM1Q2NKQ1 1148 aa27.88■■■□□ 2.05
SMDT1-201ENST00000331479 WDR72Q3MJ13 1102 aa27.88■■■□□ 2.05
SMDT1-201ENST00000331479 FBXL13Q8NEE6 735 aa27.88■■■□□ 2.05
SMDT1-201ENST00000331479 APPL2Q8NEU8 664 aa27.88■■■□□ 2.05
SMDT1-201ENST00000331479 TUBGCP2Q9BSJ2 902 aa27.88■■■□□ 2.05
SMDT1-201ENST00000331479 NSUN3Q9H649 340 aaKnown RBP27.88■■■□□ 2.05
SMDT1-201ENST00000331479 RAB20Q9NX57 234 aa27.88■■■□□ 2.05
SMDT1-201ENST00000331479 L1RE1Q9UN81 338 aa27.88■■■□□ 2.05
SMDT1-201ENST00000331479 TSC2P49815 1807 aa27.88■■■□□ 2.05
SMDT1-201ENST00000331479 PER2O15055 1255 aa27.87■■■□□ 2.05
SMDT1-201ENST00000331479 CNPP09543 421 aaKnown RBP27.87■■■□□ 2.05
SMDT1-201ENST00000331479 ZNF18P17022 549 aa27.87■■■□□ 2.05
SMDT1-201ENST00000331479 RPL17P18621 184 aaKnown RBP27.87■■■□□ 2.05
SMDT1-201ENST00000331479 EEF1GP26641 437 aaKnown RBP27.87■■■□□ 2.05
SMDT1-201ENST00000331479 MYL7Q01449 175 aa27.87■■■□□ 2.05
SMDT1-201ENST00000331479 PSMD5Q16401 504 aa27.87■■■□□ 2.05
SMDT1-201ENST00000331479 MAN2A1Q16706 1144 aa27.87■■■□□ 2.05
SMDT1-201ENST00000331479 TCEAL5Q5H9L2 206 aa27.87■■■□□ 2.05
SMDT1-201ENST00000331479 WSCD1Q658N2 575 aa27.87■■■□□ 2.05
SMDT1-201ENST00000331479 RSPO2Q6UXX9 243 aaPredicted RBP27.87■■■□□ 2.05
SMDT1-201ENST00000331479 RBM23Q86U06 439 aaKnown RBP27.87■■■□□ 2.05
SMDT1-201ENST00000331479 MICALL1Q8N3F8 863 aa27.87■■■□□ 2.05
SMDT1-201ENST00000331479 APOBEC3GQ9HC16 384 aaKnown RBP27.87■■■□□ 2.05
SMDT1-201ENST00000331479 NXF1Q9UBU9 619 aaKnown RBP27.87■■■□□ 2.05
SMDT1-201ENST00000331479 POLIQ9UNA4 740 aa27.87■■■□□ 2.05
SMDT1-201ENST00000331479 SSX2IPQ9Y2D8 614 aa27.87■■■□□ 2.05
SMDT1-201ENST00000331479 SMTNL1A8MU46 457 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 CYP11A1P05108 521 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 TYMPP19971 482 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 ZNF445P59923 1031 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 SOWAHAQ2M3V2 549 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 MIIPQ5JXC2 388 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 LUZP1Q86V48 1076 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 GPR65Q8IYL9 337 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 PDCL2Q8N4E4 241 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 RXFP1Q9HBX9 757 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 PMM2O15305 246 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 CLSTN1O94985 981 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 PRKCSHP14314 528 aaPredicted RBP27.86■■■□□ 2.05
SMDT1-201ENST00000331479 GTF2F1P35269 517 aaKnown RBP eCLIP27.86■■■□□ 2.053e-17■■■□□ 15.1
SMDT1-201ENST00000331479 YWHAHQ04917 246 aaPredicted RBP27.86■■■□□ 2.05
SMDT1-201ENST00000331479 ANKS3Q6ZW76 656 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 LIMS2Q7Z4I7 341 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 KLHL5Q96PQ7 755 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 CLSTN3Q9BQT9 956 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 TSPY26PQ9H489 355 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 MTRRQ9UBK8 725 aa27.86■■■□□ 2.05
SMDT1-201ENST00000331479 XIRP2A4UGR9 3374 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 BECN2A8MW95 431 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 TEX28O15482 410 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 ADAM12O43184 909 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 HUS1O60921 280 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 OAZ2O95190 189 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 CAVIN2O95810 425 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 ATP1A3P13637 1013 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 KRT31Q15323 416 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 VWA3BQ502W6 1294 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 ZNF667Q5HYK9 610 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 TOP6BLQ8N6T0 577 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 TAF4BQ92750 862 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 MMS19Q96T76 1030 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 TAB2Q9NYJ8 693 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 DSEQ9UL01 958 aa27.85■■■□□ 2.05
SMDT1-201ENST00000331479 SPTBN5Q9NRC6 3674 aaKnown RBP27.84■■■□□ 2.05
SMDT1-201ENST00000331479 P4HA2O15460 535 aa27.84■■■□□ 2.05
SMDT1-201ENST00000331479 TBC1D4O60343 1298 aa27.84■■■□□ 2.05
SMDT1-201ENST00000331479 N4BP1O75113 896 aaKnown RBP27.84■■■□□ 2.05
SMDT1-201ENST00000331479 NRIP1P48552 1158 aa27.84■■■□□ 2.05
SMDT1-201ENST00000331479 TNNC1P63316 161 aa27.84■■■□□ 2.05
SMDT1-201ENST00000331479 NOP14P78316 857 aaKnown RBP27.84■■■□□ 2.05
SMDT1-201ENST00000331479 OVOS1Q6IE37 1185 aa27.84■■■□□ 2.05
SMDT1-201ENST00000331479 GLYCTKQ8IVS8 523 aa27.84■■■□□ 2.05
SMDT1-201ENST00000331479 TLE6Q9H808 572 aa27.84■■■□□ 2.05
SMDT1-201ENST00000331479 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.84■■■□□ 2.05
SMDT1-201ENST00000331479 COL6A3P12111 3177 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 PRUNE2Q8WUY3 3088 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 ARHGEF37A1IGU5 675 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 HYAL1Q12794 435 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 CCDC85BQ15834 202 aaPredicted RBP27.83■■■□□ 2.05
SMDT1-201ENST00000331479 PDXDC1Q6P996 788 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 LMO3Q8TAP4 145 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 FAM200AQ8TCP9 573 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 KBTBD7Q8WVZ9 684 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 RTP3Q9BQQ7 232 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 EMILIN2Q9BXX0 1053 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 IMPG2Q9BZV3 1241 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 NDST4Q9H3R1 872 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 SMYD3Q9H7B4 428 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 FNIP2Q9P278 1114 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 BACE2Q9Y5Z0 518 aa27.83■■■□□ 2.05
SMDT1-201ENST00000331479 CLASP2O75122 1294 aaKnown RBP27.82■■■□□ 2.04
SMDT1-201ENST00000331479 DUSP6Q16828 381 aa27.82■■■□□ 2.04
SMDT1-201ENST00000331479 CTXN3Q4LDR2 81 aa27.82■■■□□ 2.04
SMDT1-201ENST00000331479 SCARA5Q6ZMJ2 495 aa27.82■■■□□ 2.04
SMDT1-201ENST00000331479 DPH6Q7L8W6 267 aa27.82■■■□□ 2.04
SMDT1-201ENST00000331479 OSTM1Q86WC4 334 aa27.82■■■□□ 2.04
SMDT1-201ENST00000331479 METTL23Q86XA0 190 aa27.82■■■□□ 2.04
SMDT1-201ENST00000331479 ADGRF2Q8IZF7 708 aa27.82■■■□□ 2.04
SMDT1-201ENST00000331479 VPS16Q9H269 839 aa27.82■■■□□ 2.04
SMDT1-201ENST00000331479 LIMA1Q9UHB6 759 aaKnown RBP27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms