RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 C6orf229H3BNL8 230 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 MEIS1O00470 390 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 TGDSO95455 350 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 GAP43P17677 238 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 TTBK2Q6IQ55 1244 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 RIPOR1Q6ZS17 1223 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 NOP9Q86U38 636 aaKnown RBP25.65■■□□□ 1.7
SOX1-201ENST00000330949 OR6Y1Q8NGX8 325 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 PIP4K2CQ8TBX8 421 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 RPGRQ92834 1020 aaKnown RBP25.65■■□□□ 1.7
SOX1-201ENST00000330949 ZNF653Q96CK0 615 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 NMD3Q96D46 503 aaKnown RBP25.65■■□□□ 1.7
SOX1-201ENST00000330949 DGCR14Q96DF8 476 aaKnown RBP25.65■■□□□ 1.7
SOX1-201ENST00000330949 TSSK1BQ9BXA7 367 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 LDHCP07864 332 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 HARSP12081 509 aaKnown RBP25.65■■□□□ 1.7
SOX1-201ENST00000330949 RPA1P27694 616 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 ASPHQ12797 758 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 Q4G0T1 1027 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 ASPRV1Q53RT3 343 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 PCDHB18PQ96TA0 734 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 MAK16Q9BXY0 300 aaKnown RBP25.65■■□□□ 1.7
SOX1-201ENST00000330949 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.65■■□□□ 1.7
SOX1-201ENST00000330949 A0A1W2PPM1 405 aa25.64■■□□□ 1.7
SOX1-201ENST00000330949 PIK3CDO00329 1044 aa25.64■■□□□ 1.7
SOX1-201ENST00000330949 RASSF3Q86WH2 238 aa25.64■■□□□ 1.7
SOX1-201ENST00000330949 HAUS1Q96CS2 278 aa25.64■■□□□ 1.7
SOX1-201ENST00000330949 PNMA6FA0A0J9YX94 578 aa25.64■■□□□ 1.7
SOX1-201ENST00000330949 WDR91A4D1P6 747 aa25.64■■□□□ 1.7
SOX1-201ENST00000330949 B2RBV5 119 aa25.64■■□□□ 1.7
SOX1-201ENST00000330949 TM9SF1O15321 606 aa25.64■■□□□ 1.7
SOX1-201ENST00000330949 DPP8Q6V1X1 898 aaPredicted RBP25.64■■□□□ 1.7
SOX1-201ENST00000330949 PRR11Q96HE9 360 aaPredicted RBP25.64■■□□□ 1.7
SOX1-201ENST00000330949 RANBP17Q9H2T7 1088 aaKnown RBP25.64■■□□□ 1.7
SOX1-201ENST00000330949 NAV1Q8NEY1 1877 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 EML1O00423 815 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 FKBP6O75344 327 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 SULT2A1Q06520 285 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 OLFML2BQ68BL8 750 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 C16orf86Q6ZW13 317 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 ADGRG6Q86SQ4 1221 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 SATL1Q86VE3 508 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 RNF168Q8IYW5 571 aaPredicted RBP25.64■■□□□ 1.69
SOX1-201ENST00000330949 SLC5A5Q92911 643 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 TMEM165Q9HC07 324 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 CLIC5Q9NZA1 410 aa25.64■■□□□ 1.69
SOX1-201ENST00000330949 AHDC1Q5TGY3 1603 aaPredicted RBP25.63■■□□□ 1.69
SOX1-201ENST00000330949 hCG_2014768A0A024R1R8 64 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 TMCO4Q5TGY1 634 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 FAM196AQ6ZSG2 479 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 LMO3Q8TAP4 145 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 PANX3Q96QZ0 392 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 POLR3CQ9BUI4 534 aaPredicted RBP25.63■■□□□ 1.69
SOX1-201ENST00000330949 VPS37BQ9H9H4 285 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 ZNF232Q9UNY5 417 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 SUGT1Q9Y2Z0 365 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 TM7SF2O76062 418 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 AKR1B1P15121 316 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 SLC1A1P43005 524 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 KCTD1Q719H9 257 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 PDSS2Q86YH6 399 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 ZNF276Q8N554 614 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 OXNAD1Q96HP4 312 aaPredicted RBP25.63■■□□□ 1.69
SOX1-201ENST00000330949 AGBL1Q96MI9 1066 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 CYTH2Q99418 400 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 KCNK13Q9HB14 408 aa25.63■■□□□ 1.69
SOX1-201ENST00000330949 FCHO1O14526 889 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 GRIA2P42262 883 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 CETN1Q12798 172 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 CCNG2Q16589 344 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 R3HDM2Q9Y2K5 976 aaKnown RBP25.62■■□□□ 1.69
SOX1-201ENST00000330949 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.62■■□□□ 1.69
SOX1-201ENST00000330949 A0A0J9YVX5 310 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 H3BRJ5 948 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 GTF2IP78347 998 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 P3H1Q32P28 736 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 EPS8L1Q8TE68 723 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 MAML3Q96JK9 1138 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 CLMNQ96JQ2 1002 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 PSTPIP2Q9H939 334 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 STK24Q9Y6E0 443 aa25.62■■□□□ 1.69
SOX1-201ENST00000330949 BUD23O43709 281 aaKnown RBP25.61■■□□□ 1.69
SOX1-201ENST00000330949 SPATA31C1P0DKV0 1188 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 UQCRBP14927 111 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 CYP2J2P51589 502 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 BFSP1Q12934 665 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 B3GNT6Q6ZMB0 384 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 DLDP09622 509 aaKnown RBP25.61■■□□□ 1.69
SOX1-201ENST00000330949 PPP4CP60510 307 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 DNAL1Q4LDG9 190 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 TRAPPC3LQ5T215 181 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 C1orf146Q5VVC0 180 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 NSMFQ6X4W1 530 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 BHMT2Q9H2M3 363 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 ARHGEF4Q9NR80 690 aa25.61■■□□□ 1.69
SOX1-201ENST00000330949 TNRC6CQ9HCJ0 1690 aaKnown RBP25.6■■□□□ 1.69
SOX1-201ENST00000330949 MAGEA10P43363 369 aaPredicted RBP25.6■■□□□ 1.69
SOX1-201ENST00000330949 AAGABQ6PD74 315 aa25.6■■□□□ 1.69
SOX1-201ENST00000330949 ULK2Q8IYT8 1036 aa25.6■■□□□ 1.69
SOX1-201ENST00000330949 IKZF4Q9H2S9 585 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms