RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PON1P27169 355 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ALDH1A3P47895 512 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 TMPRSS15P98073 1019 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ZNF211Q13398 564 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 BYSLQ13895 437 aaKnown RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 MAPRE2Q15555 327 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 TEDDM1Q5T9Z0 273 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 MCEEQ96PE7 176 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ASCC2Q9H1I8 757 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 EML4Q9HC35 981 aaKnown RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.98□□□□□ -0.493e-6■■■■□ 22.8
COL4A5-201ENST00000328300 APOBEC2Q9Y235 224 aaKnown RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 NALCNQ8IZF0 1738 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 MAP3K7O43318 606 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 SLCO1A2P46721 670 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 NFE2Q16621 373 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 PITPNM3Q9BZ71 974 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 SRGAP2O75044 1071 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 SMIM24O75264 130 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 MMEP08473 750 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 KLRC1P26715 233 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ETFBP38117 255 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 OTOP1Q7RTM1 612 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ZBED8Q8IZ13 594 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 COG1Q8WTW3 980 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 TBK1Q9UHD2 729 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 TMEM247A6NEH6 219 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 H3BRB1 525 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 MOCS2O96007 188 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ITGB3P05106 788 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 THPOP40225 353 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 KRT33BQ14525 404 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 E4F1Q66K89 784 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 REPS2Q8NFH8 660 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 VCPIP1Q96JH7 1222 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 TUT1Q9H6E5 874 aaKnown RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 XAB2Q9HCS7 855 aaKnown RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 AGPAT5Q9NUQ2 364 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 PEX19P40855 299 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ERVK-9P63128 1117 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ERVK-24P63145 666 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 FBXO16Q8IX29 292 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 CPA5Q8WXQ8 436 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ZNF668Q96K58 619 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 OSBPL8Q9BZF1 889 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 TRIM45Q9H8W5 580 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ANGPTL2Q9UKU9 493 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ORC6Q9Y5N6 252 aa11.98□□□□□ -0.49
COL4A5-201ENST00000328300 ZC3H4Q9UPT8 1303 aaKnown RBP11.98□□□□□ -0.49
COL4A5-201ENST00000328300 E5RI56 91 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 TADA3O75528 432 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 DDNO94850 711 aaPredicted RBP11.97□□□□□ -0.49
COL4A5-201ENST00000328300 HARS2P49590 506 aaKnown RBP11.97□□□□□ -0.49
COL4A5-201ENST00000328300 GCNT1Q02742 428 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 THEGQ9P2T0 379 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 PACSIN2Q9UNF0 486 aaPredicted RBP11.97□□□□□ -0.49
COL4A5-201ENST00000328300 ALDH7A1P49419 539 aaKnown RBP11.97□□□□□ -0.49
COL4A5-201ENST00000328300 TATDN1Q6P1N9 297 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 MTMR14Q8NCE2 650 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 SCFD1Q8WVM8 642 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 UPF3AQ9H1J1 476 aaKnown RBP11.97□□□□□ -0.49
COL4A5-201ENST00000328300 MDM2Q00987 491 aaPredicted RBP11.97□□□□□ -0.49
COL4A5-201ENST00000328300 LAMTOR4Q0VGL1 99 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 TBCCQ15814 346 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 NAPEPLDQ6IQ20 393 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 MYLK4Q86YV6 388 aaPredicted RBP11.97□□□□□ -0.49
COL4A5-201ENST00000328300 TBC1D19Q8N5T2 526 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 SLC7A14Q8TBB6 771 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 SPON2Q9BUD6 331 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 ACKR2O00590 384 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 PRRG1O14668 218 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 ANXA9O76027 345 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 PYGBP11216 843 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 SARSP49591 514 aaKnown RBP11.97□□□□□ -0.49
COL4A5-201ENST00000328300 ART3Q13508 389 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 AGBL2Q5U5Z8 902 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 MMTAG2Q9BU76 263 aaKnown RBP11.97□□□□□ -0.49
COL4A5-201ENST00000328300 SH3BP1Q9Y3L3 701 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 DFFAO00273 331 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 GSTA4O15217 222 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 OPHN1O60890 802 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 SLC4A1P02730 911 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 IFNA8P32881 189 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 RARRES1P49788 294 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 GRIK4Q16099 956 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 SLC27A1Q6PCB7 646 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 MTMR9Q96QG7 549 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 CHP1Q99653 195 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 SIK2Q9H0K1 926 aa11.97□□□□□ -0.49
COL4A5-201ENST00000328300 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.97□□□□□ -0.492e-9■■□□□ 13.9
COL4A5-201ENST00000328300 NEMP1O14524 444 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 CDH16O75309 829 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 OR1G1P47890 313 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 RTP1P59025 263 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 TSTA3Q13630 321 aaPredicted RBP11.96□□□□□ -0.49
COL4A5-201ENST00000328300 KLHL29Q96CT2 875 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 TMEM169Q96HH4 297 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 ZFATQ9P243 1243 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 KDM1AO60341 852 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms